RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 AADACP22760 399 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 HLA-DMAP28067 261 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 CD1BP29016 333 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 FCGR2CP31995 323 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 RAG2P55895 527 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 EBI3Q14213 229 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 GLDNQ6ZMI3 551 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 Q6ZSV7 163 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 LYSMD2Q8IV50 215 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 OR5H2Q8NGV7 314 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 SMIM4Q8WVI0 70 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 EAF1Q96JC9 268 aaPredicted RBP11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 RBM14Q96PK6 669 aaKnown RBP11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 SOSTQ9BQB4 213 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 SDHAF2Q9NX18 166 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 MTFP1Q9UDX5 166 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 V9GYH0 126 aa11.87□□□□□ -0.51
VIPAS39-210ENST00000557466 M0R1X1 148 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 CTDSPLO15194 276 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 S100A5P33763 92 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 HRH1P35367 487 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 RFX2P48378 723 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 LUMP51884 338 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 ACTBP60709 375 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 MRPS10P82664 201 aaKnown RBP11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 HNF4GQ14541 408 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 FAM131AQ6UXB0 335 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 OVCH2Q7RTZ1 564 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 C16orf82Q7Z2V1 217 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 Q8N6K4 173 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 DRAXINQ8NBI3 349 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 FCAMRQ8WWV6 532 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 NPFFR1Q9GZQ6 430 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 RABL2AQ9UBK7 228 aaPredicted RBP11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 RABL2BQ9UNT1 228 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 GAB2Q9UQC2 676 aa11.86□□□□□ -0.51
VIPAS39-210ENST00000557466 FABP12A6NFH5 140 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 H0YJW9 148 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 RBBP9O75884 186 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 PPYP01298 95 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 MDKP21741 143 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 LINC00205P59089 165 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 DYRK1AQ13627 763 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 ZNF660Q6AZW8 331 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 CCDC190Q86UF4 302 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 ZNF383Q8NA42 475 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 OR4C13Q8NGP0 309 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 OR6Q1Q8NGQ2 317 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 OR2T10Q8NGZ9 312 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 OR4F5Q8NH21 305 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 RANBP3Q9H6Z4 567 aaPredicted RBP11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 MOB4Q9Y3A3 225 aa11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 FBN1P35555 2871 aaKnown RBP11.85□□□□□ -0.51
VIPAS39-210ENST00000557466 OR5H14A6NHG9 310 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 TSPAN9O75954 239 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 MOSP00540 346 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 IGLV2-14P01704 120 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 AMY1AP04745 511 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 AMY2AP04746 511 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 FXYD4P59646 89 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 FOXL1Q12952 345 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 AWAT1Q58HT5 328 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 OR5AN1Q8NGI8 311 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 SECTM1Q8WVN6 248 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 GIMAP1Q8WWP7 306 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 AKR1E2Q96JD6 320 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 FXYD6Q9H0Q3 95 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 ZNF702PQ9H963 129 aa11.84□□□□□ -0.51
VIPAS39-210ENST00000557466 DNHD1Q96M86 4753 aa11.83□□□□□ -0.51
VIPAS39-210ENST00000557466 SH2D7A6NKC9 451 aaPredicted RBP11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 M0QYG6 137 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 GSTZ1O43708 216 aaPredicted RBP11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 COMPP49747 757 aaPredicted RBP11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 HERV-K104P61576 105 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 BLCAPP62952 87 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 SSBP1Q04837 148 aaKnown RBP11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 ZNF79Q15937 498 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 CNPY1Q3B7I2 92 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 ACTBL2Q562R1 376 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 VAX1Q5SQQ9 334 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 Q6ZS46 218 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 TMEM17Q86X19 198 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 C5orf56Q8N8D9 126 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 ZNF2Q9BSG1 426 aaPredicted RBP11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 TINAGL1Q9GZM7 467 aaPredicted RBP11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 C16orf95Q9H693 158 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 CCL28Q9NRJ3 127 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 RBMX2Q9Y388 322 aaKnown RBP11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
VIPAS39-210ENST00000557466 CD3DP04234 171 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 DUTP33316 252 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 THBS3P49746 956 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 RNASE10Q5GAN6 216 aaKnown RBP11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 DHRS11Q6UWP2 260 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 Q8N2B8 174 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
VIPAS39-210ENST00000557466 LINC01006Q8NI28 216 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms