RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 AGMATQ9BSE5 352 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 MPC1Q9Y5U8 109 aa9.6□□□□□ -0.87
SRP54-213ENST00000556994 OR5B21A6NL26 309 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 CDIPTO14735 213 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 ZG16O60844 167 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 SYNGR4O95473 234 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 GYPAP02724 150 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 COX5BP10606 129 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 CHRNA7P36544 502 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 TAS2R60P59551 318 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 PMS2P11Q13670 270 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 ACSF3Q4G176 576 aaPredicted RBP9.59□□□□□ -0.87
SRP54-213ENST00000556994 PMS2CLQ68D20 193 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 BTNL3Q6UXE8 466 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 SCCPDHQ8NBX0 429 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 OR2M7Q8NG81 312 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 BOKQ9UMX3 212 aaPredicted RBP9.59□□□□□ -0.87
SRP54-213ENST00000556994 LRP5LA4QPB2 252 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 IL18BPO95998 194 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 HRASP01112 189 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 CRYAAP02489 173 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 TFF1P04155 84 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 ARR3P36575 388 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 ALKBH6Q3KRA9 238 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 OR1L1Q8NH94 360 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 RNASEH2CQ8TDP1 164 aaKnown RBP9.59□□□□□ -0.87
SRP54-213ENST00000556994 CT55Q8WUE5 264 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 RAB24Q969Q5 203 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 C5orf30Q96GV9 206 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 STRADBQ9C0K7 418 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 OR2D2Q9H210 308 aa9.59□□□□□ -0.87
SRP54-213ENST00000556994 MRPS18CQ9Y3D5 142 aaKnown RBP9.59□□□□□ -0.87
SRP54-213ENST00000556994 PIGBOS1A0A0B4J2F0 54 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 CTXND1A0A1B0GTU2 59 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 ODAMA1E959 279 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 NPIPB11E5RHQ5 1161 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 MKRN2OSH3BPM6 223 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 J3QT63 122 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 RBMXL2O75526 392 aaKnown RBP9.58□□□□□ -0.88
SRP54-213ENST00000556994 NEURL1O76050 574 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 S1PR2O95136 353 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 WNT2P09544 360 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 NPPCP23582 126 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 OR52L2PQ8NGH6 319 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 ACTR3CQ9C0K3 210 aaPredicted RBP9.58□□□□□ -0.88
SRP54-213ENST00000556994 ZNF703Q9H7S9 590 aaPredicted RBP9.58□□□□□ -0.88
SRP54-213ENST00000556994 WASF3Q9UPY6 502 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 ASPMQ8IZT6 3477 aa9.58□□□□□ -0.88
SRP54-213ENST00000556994 A0A1B0GUS0 222 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 TMEM250H0YL14 139 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 NXPH2O95156 264 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 SERPINA7P05543 415 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 GRPP07492 148 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 OR4A8P0C604 315 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 PAX1P15863 534 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 OR3A1P47881 315 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 UBE2G2P60604 165 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 SSX2Q16385 188 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 GCSAMLQ5JQS6 135 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 CENPVQ7Z7K6 275 aaPredicted RBP9.57□□□□□ -0.88
SRP54-213ENST00000556994 OR2T10Q8NGZ9 312 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 TMEM170AQ8WVE7 144 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 WDYHV1Q96HA8 205 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 PARD6GQ9BYG4 376 aaPredicted RBP9.57□□□□□ -0.88
SRP54-213ENST00000556994 PKIBQ9C010 78 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 DSPP15924 2871 aaKnown RBP9.57□□□□□ -0.88
SRP54-213ENST00000556994 PGPEP1LA6NFU8 196 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 LRRC30A6NM36 301 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 C17orf98A8MV24 154 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 CELA3BP08861 270 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 TRA2AQ13595 282 aaKnown RBP eCLIP9.57□□□□□ -0.88
SRP54-213ENST00000556994 MDP1Q86V88 176 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 CXorf67Q86X51 503 aaPredicted RBP9.57□□□□□ -0.88
SRP54-213ENST00000556994 TGIF2LYQ8IUE0 185 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 TGIF2LXQ8IUE1 241 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 MRPL41Q8IXM3 137 aaKnown RBP9.57□□□□□ -0.88
SRP54-213ENST00000556994 OR10P1Q8NGE3 313 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 TMEM147Q9BVK8 224 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 TIMM9Q9Y5J7 89 aa9.57□□□□□ -0.88
SRP54-213ENST00000556994 PMS2P5A8MQ11 134 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 PSPNO60542 156 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 IGHEP01854 428 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 HOXA6P31267 233 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 MPLP40238 635 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 BRWD1-AS2P59051 145 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 SSPNQ14714 243 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 ACTL10Q5JWF8 245 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 DCAF12Q5T6F0 453 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 FAM78BQ5VT40 261 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 LINC00696Q6ZRV3 163 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 DTD1Q8TEA8 209 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 FAM173AQ9BQD7 235 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 DERL1Q9BUN8 251 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 NPCDR1Q9BY65 106 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 OR2J1Q9GZK6 312 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 TRAV38-1A0A0B4J264 116 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 C11orf94C9JXX5 98 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 FAM90A26D6RGX4 464 aa9.56□□□□□ -0.88
SRP54-213ENST00000556994 COX5AP20674 150 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms