RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 IGKV6D-21A0A0A0MT36 114 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ANKRD20A5PA0PJZ0 165 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF705GA8MUZ8 300 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 FXYD1O00168 92 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TNFRSF11BO00300 401 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 DLEU1O43261 78 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CBR3O75828 277 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 GATBO75879 557 aaKnown RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 OR2A4O95047 310 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 YIF1AO95070 293 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 VAMP5O95183 116 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 RAB36O95755 333 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF682O95780 498 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CFDP00746 253 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF688P0C7X2 276 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CCL2P13500 99 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CBR1P16152 277 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 MPIP34949 423 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 APLNRP35414 380 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 GPR4P46093 362 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 IDH2P48735 452 aaKnown RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 DAPP51397 102 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 SMIM11AP58511 58 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 SNRPGP62308 76 aaKnown RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CDK5Q00535 292 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 OR2F1Q13607 317 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 HTR4Q13639 388 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 OR8G1Q15617 311 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TAL2Q16559 108 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 C18orf21Q32NC0 220 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 FAM74A1Q5RGS3 127 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 C10orf91Q5T1B1 145 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 C9orf64Q5T6V5 341 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TMEM244Q5VVB8 128 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 OR10K2Q6IF99 312 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 LPCAT3Q6P1A2 487 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 FAHD1Q6P587 224 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 DEGS2Q6QHC5 323 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ALKAL2Q6UX46 152 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CASP12Q6UXS9 341 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 SSX7Q7RTT5 188 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CYP4Z1Q86W10 505 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 WDFY1Q8IWB7 410 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ZFP82Q8N141 532 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 STK40Q8N2I9 435 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ACBD7Q8N6N7 88 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CYB561D1Q8N8Q1 229 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 OR4K15Q8NH41 348 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 LGALS14Q8TCE9 139 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 GNPDA2Q8TDQ7 276 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 NEK7Q8TDX7 302 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TWIST2Q8WVJ9 160 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 LCN9Q8WX39 176 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CACNG8Q8WXS5 425 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TNFRSF14Q92956 283 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 CMBLQ96DG6 245 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 OR2M4Q96R27 311 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 OR2A7Q96R45 310 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 RSG1Q9BU20 258 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TMEM243Q9BU79 118 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TAPBPLQ9BX59 468 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 SIRT7Q9NRC8 400 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TXNL4BQ9NX01 149 aaKnown RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 RASL12Q9NYN1 266 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TAS2R5Q9NYW4 299 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 SLC22A14Q9Y267 594 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF257Q9Y2Q1 563 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 IGLV3-16A0A075B6K0 115 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 FXYD6-FXYD2A0A087WZ82 144 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 A0A096LPI6 279 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 A0A0A6YYH2 397 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 TRAV8-4A0A0B4J246 113 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 IGKV1-8A0A0C4DH67 115 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 TRDV1A0A1B0GX56 115 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 C20orf202A1L168 122 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 GGT3PA6NGU5 568 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 A6NJ64 397 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 COLCA2A8K830 154 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 A8MT66 165 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 NDUFC2-KCTD14E9PQ53 114 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 F5H5P2 479 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 BHLHE40O14503 412 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 ARPC5O15511 151 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 B4GALT5O43286 388 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 GSTZ1O43708 216 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-210ENST00000556718 GLSO94925 669 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-210ENST00000556718 P01737 135 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 APCSP02743 223 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 CRHP06850 196 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 GUSBP08236 651 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 UCHL1P09936 223 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 OR5AL1P0C617 328 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 LINC00032P0C843 101 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 SLC35E2BP0CK96 405 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 NQO2P16083 231 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF823P16415 610 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 CD70P32970 193 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 S100A3P33764 101 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 TGFBR1P36897 503 aa2.79□□□□□ -1.96
PRPF39-210ENST00000556718 DNASE1L1P49184 302 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms