RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CD300LFQ8TDQ1 290 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 CHPT1Q8WUD6 406 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 RTN4IP1Q8WWV3 396 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-220ENST00000555634 ABHD14BQ96IU4 210 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 TBX15Q96SF7 602 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 OCEL1Q9H607 264 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 RNF150Q9ULK6 438 aa9.14□□□□□ -0.95
SHMT2-220ENST00000555634 IGKV1D-13A0A0B4J2D9 117 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 IGHV1-69DA0A0B4J2H0 117 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 RNASEK-C17orf49H0YIS7 233 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 BUB1B-PAK6H3BSN5 160 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 NPFFO15130 113 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 CREBL2O60519 120 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-220ENST00000555634 IFNA2P01563 188 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 IGHV1-69P01742 117 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 SERPINE2P07093 398 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 IGKV1-13P0DP09 117 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 RRASP10301 218 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 FOSL1P15407 271 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 SRP14P37108 136 aaKnown RBP9.13□□□□□ -0.95
SHMT2-220ENST00000555634 RND3P61587 244 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF818PQ6ZRF7 136 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 PDZD9Q8IXQ8 264 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 OR8H3Q8N146 312 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 OR51H1Q8NH63 302 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 COQ8AQ8NI60 647 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 RNASE11Q8TAA1 199 aaKnown RBP9.13□□□□□ -0.95
SHMT2-220ENST00000555634 AIFM2Q9BRQ8 373 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 PARP12Q9H0J9 701 aaKnown RBP9.13□□□□□ -0.95
SHMT2-220ENST00000555634 CCL28Q9NRJ3 127 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 DPM3Q9P2X0 92 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 VSIG4Q9Y279 399 aa9.13□□□□□ -0.95
SHMT2-220ENST00000555634 A8MV72 311 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-220ENST00000555634 ODF3BA8MYP8 253 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 H7C2Y5 167 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 SLC31A2O15432 143 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 TNFSF12O43508 249 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 IGLV1-47P01700 117 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 FBP1P09467 338 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 CD99P14209 185 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 PI3P19957 117 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 BRS3P32247 399 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 MC5RP33032 325 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 SAA4P35542 130 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF137PP52743 207 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 ERVK-16P61578 105 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 OXA1LQ15070 435 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 DHRS7BQ6IAN0 325 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF833PQ6ZTB9 187 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 C11orf42Q8N5U0 333 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 OR4P4Q8NGL7 312 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 OR4S2Q8NH73 311 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 PHB2Q99623 299 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 MARVELD1Q9BSK0 173 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 MS4A7Q9GZW8 240 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-220ENST00000555634 C5orf66Q9H5L9 145 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 NAA60Q9H7X0 242 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 YAE1D1Q9NRH1 226 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 SDHAF2Q9NX18 166 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 GPR132Q9UNW8 380 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 GAB2Q9UQC2 676 aa9.12□□□□□ -0.95
SHMT2-220ENST00000555634 MAP1AP78559 2803 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-220ENST00000555634 CSMD2Q7Z408 3487 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 C3orf85A0A1B0GTC6 90 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 A0A1W2PRD5 423 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 A0A1W2PRF3 423 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 A0A1W2PRM7 423 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 BTBD17A6NE02 478 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 CRYM-AS1A6NIL9 109 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 H0Y980 276 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 MPPED1O15442 326 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 SSNA1O43805 119 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 OR4E1P0C645 316 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 RPA2P15927 270 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 ANXA7P20073 488 aaKnown RBP9.11□□□□□ -0.95
SHMT2-220ENST00000555634 F2RP25116 425 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 GNRHRP30968 328 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF134P52741 427 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 DHODHQ02127 395 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF816Q0VGE8 651 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-220ENST00000555634 TPTE2P1Q5T6R2 138 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 LYG2Q86SG7 212 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 SLC25A42Q86VD7 318 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 CIARTQ8N365 385 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-220ENST00000555634 MALSU1Q96EH3 234 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 AGMATQ9BSE5 352 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 ALX4Q9H161 411 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-220ENST00000555634 NUP50Q9UKX7 468 aa9.11□□□□□ -0.95
SHMT2-220ENST00000555634 CENPVL3A0A0U1RRI6 287 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 PGLYRP1O75594 196 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-220ENST00000555634 MECP2P51608 486 aaKnown RBP9.1□□□□□ -0.95
SHMT2-220ENST00000555634 AKR1C2P52895 323 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 SSX2Q16385 188 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 TATDN3Q17R31 274 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 RPL39P5Q59GN2 51 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 LIN54Q6MZP7 749 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 GLDNQ6ZMI3 551 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-220ENST00000555634 MOB3BQ86TA1 216 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms