RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 C14orf105Q9NVL8 296 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 ZNF230Q9UIE0 474 aaPredicted RBP3.36□□□□□ -1.87
VRK1-203ENST00000555067 ANAPC10Q9UM13 185 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 TMEM14AQ9Y6G1 99 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 HECW2Q9P2P5 1572 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 THSD7AQ9UPZ6 1657 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 MTUS2Q5JR59 1369 aa3.36□□□□□ -1.87
VRK1-203ENST00000555067 BAZ2AQ9UIF9 1905 aaKnown RBP3.35□□□□□ -1.87
VRK1-203ENST00000555067 AHDC1Q5TGY3 1603 aaPredicted RBP3.35□□□□□ -1.87
VRK1-203ENST00000555067 A0A096LNJ9 63 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 TMX2-CTNND1H3BSU7 103 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 DEDDO75618 318 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 FSTL3O95633 263 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 IFNA1P01562 189 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 IGHMP01871 453 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 OPRK1P41145 380 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 GNG3P63215 75 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 BTN3A2P78410 334 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 KLHL12Q53G59 568 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 C3orf33Q6P1S2 294 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 LY6G5BQ8NDX9 201 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 OR51A2Q8NGJ7 313 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 OR2T27Q8NH04 317 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 OR4A5Q8NH83 315 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 MCFD2Q8NI22 146 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 PYDC1Q8WXC3 89 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 KLK6Q92876 244 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 BORCS7Q96B45 105 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 ABHD14BQ96IU4 210 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 PLA2G12AQ9BZM1 189 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 PLA2G2FQ9BZM2 168 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 ABCG5Q9H222 651 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 BOLA2Q9H3K6 86 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 LHX9Q9NQ69 397 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 ENOPH1Q9UHY7 261 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 RWDD2AQ9UIY3 292 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 DNAJC12Q9UKB3 198 aa3.35□□□□□ -1.87
VRK1-203ENST00000555067 MEGF6O75095 1541 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 SYNMO15061 1565 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 EXOC1LA0A1B0GW35 172 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 FUOMA2VDF0 154 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 PDE6DO43924 150 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 ATG12O94817 140 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 IFNA14P01570 189 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 DAPP51397 102 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 ZNF133P52736 654 aaPredicted RBP3.34□□□□□ -1.87
VRK1-203ENST00000555067 PDGFRLQ15198 375 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 DEFB116Q30KQ4 102 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 TEX36Q5VZQ5 186 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 CYB5R2Q6BCY4 276 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 OR52L1Q8NGH7 329 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 OR8S1Q8NH09 359 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 OR52N1Q8NH53 320 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 KCTD4Q8WVF5 259 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 SLC25A46Q96AG3 418 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 SHANK2-AS3Q9BTD1 123 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 DDA1Q9BW61 102 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 RNASE7Q9H1E1 156 aaKnown RBP3.34□□□□□ -1.87
VRK1-203ENST00000555067 TBX21Q9UL17 535 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 NDUFAF1Q9Y375 327 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 COQ4Q9Y3A0 265 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 UTP11Q9Y3A2 253 aaKnown RBP3.34□□□□□ -1.87
VRK1-203ENST00000555067 UFC1Q9Y3C8 167 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 FIS1Q9Y3D6 152 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 ITGB4P16144 1822 aa3.34□□□□□ -1.87
VRK1-203ENST00000555067 ARHGAP21Q5T5U3 1957 aa3.34□□□□□ -1.88
VRK1-203ENST00000555067 IGHV1-3A0A0C4DH29 117 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 IGKV1-12A0A0C4DH73 117 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 A0A1B0GV50 99 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 OR4C45A6NMZ5 311 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 H3BSA7 217 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 PANO1I0J062 215 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 IFNA21P01568 189 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 IGKV1D-12P01611 117 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 IGLV3-27P01718 113 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 OPN1SWP03999 348 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 PFN1P07737 140 aaKnown RBP3.33□□□□□ -1.88
VRK1-203ENST00000555067 CDK2P24941 298 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 OR10J1P30954 320 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 GABRA3P34903 492 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 MPIP34949 423 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 DEFA1P59665 94 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 MMDQ15546 238 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 C5orf46Q6UWT4 87 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 TIFABQ6ZNK6 161 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 Q6ZR03 302 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 BAP18Q8IXM2 172 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 C20orf196Q8IYI0 205 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 C1orf174Q8IYL3 243 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 ZNF101Q8IZC7 436 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 KRTCAP2Q8N6L1 136 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 ZNF285Q96NJ3 590 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 ANGPT4Q9Y264 503 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 MRPS16Q9Y3D3 137 aaKnown RBP3.33□□□□□ -1.88
VRK1-203ENST00000555067 OR51B4Q9Y5P0 310 aa3.33□□□□□ -1.88
VRK1-203ENST00000555067 CHD5Q8TDI0 1954 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 DOCK8Q8NF50 2099 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 hADV38S2A0JD32 116 aa3.32□□□□□ -1.88
VRK1-203ENST00000555067 IZUMO1RA6ND01 250 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms