RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 MOB1BQ7L9L4 216 aa8.05□□□□□ -1.12
SYNE2-213ENST00000554805 ZNF295-AS1Q8N0V1 137 aa8.05□□□□□ -1.12
SYNE2-213ENST00000554805 OR10A7Q8NGE5 316 aa8.05□□□□□ -1.12
SYNE2-213ENST00000554805 MBD3L1Q8WWY6 194 aa8.05□□□□□ -1.12
SYNE2-213ENST00000554805 OR2J1Q9GZK6 312 aa8.05□□□□□ -1.12
SYNE2-213ENST00000554805 OR2D2Q9H210 308 aa8.05□□□□□ -1.12
SYNE2-213ENST00000554805 POLDIP2Q9Y2S7 368 aa8.05□□□□□ -1.12
SYNE2-213ENST00000554805 DMXL2Q8TDJ6 3036 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 DOCK11Q5JSL3 2073 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 SLC25A6P12236 298 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 MRPL49Q13405 166 aaKnown RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 TBC1D28Q2M2D7 210 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 FFAR4Q5NUL3 377 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 BTNL3Q6UXE8 466 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 SCCPDHQ8NBX0 429 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR13D1Q8NGV5 346 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR1L1Q8NH94 360 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 PSMG3Q9BT73 122 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR51I2Q9H344 312 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 NAT8Q9UHE5 227 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 MRPS18CQ9Y3D5 142 aaKnown RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 PPP5D1E7EU14 171 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 GATCO43716 136 aaKnown RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 ZNF585BQ52M93 769 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR10G4Q8NGN3 311 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR10G9Q8NGN4 311 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR10G7Q8NGN6 311 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 RFESDQ8TAC1 157 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 TMEM37Q8WXS4 190 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 GTF3AQ92664 365 aaKnown RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 PLPPR2Q96GM1 343 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OTOGLQ3ZCN5 2332 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 KIAA1324LA8MWY0 1029 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 TSTD3H0UI37 97 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 MPLP40238 635 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 GABRA2P47869 451 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 MEOX1P50221 254 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 MEF2BQ02080 365 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 FAM53AQ6NSI3 398 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-213ENST00000554805 ZNF66Q6ZN08 573 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR10P1Q8NGE3 313 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 OR52L2PQ8NGH6 319 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 PKIBQ9C010 78 aa8.04□□□□□ -1.12
SYNE2-213ENST00000554805 IGHV3-43A0A0B4J1X8 118 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 TGOLN2O43493 480 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 IGHV3-43DP0DP04 118 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 GALR1P47211 349 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 SLC10A1Q14973 349 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 RTP5Q14D33 572 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 RNPS1Q15287 305 aaKnown RBP8.03□□□□□ -1.12
SYNE2-213ENST00000554805 ALKBH6Q3KRA9 238 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 Q6P435 159 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 GATAD1Q8WUU5 269 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 SDSLQ96GA7 329 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 HIPK2Q9H2X6 1198 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 ARHGAP21Q5T5U3 1957 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 TRBV6-6A0A0A6YYG2 114 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 DEFB108AA8MXU0 73 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 RAMP3O60896 148 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 CELA3BP08861 270 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 PPP1CBP62140 327 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 ARG2P78540 354 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 TNFRSF9Q07011 255 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 CATR1Q13166 79 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 CST9LP1Q5W188 147 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 SSX9Q7RTT3 188 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 RPP25LQ8N5L8 163 aaKnown RBP8.03□□□□□ -1.12
SYNE2-213ENST00000554805 GALMQ96C23 342 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 P2RX4Q99571 388 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 ACTR3CQ9C0K3 210 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-213ENST00000554805 CTDSP1Q9GZU7 261 aa8.03□□□□□ -1.12
SYNE2-213ENST00000554805 AURKAIP1Q9NWT8 199 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-213ENST00000554805 PAGE4O60829 102 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 TFF1P04155 84 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 UBE2G2P60604 165 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 AESQ08117 197 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 USF2Q15853 346 aaPredicted RBP8.02□□□□□ -1.12
SYNE2-213ENST00000554805 ZNF826PQ6ZT77 177 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 TPRX1Q8N7U7 411 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 OR4X1Q8NH49 305 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 MRGPRDQ8TDS7 321 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 MEGF10Q96KG7 1140 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 PCGF1Q9BSM1 259 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 GPR87Q9BY21 358 aa8.02□□□□□ -1.12
SYNE2-213ENST00000554805 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.02□□□□□ -1.12
SYNE2-213ENST00000554805 NCKAP5O14513 1909 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 XKRY2A2RUG3 117 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 HAND1O96004 215 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 DEFA4P12838 97 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 HIST1H1BP16401 226 aaKnown RBP8.02□□□□□ -1.13
SYNE2-213ENST00000554805 CHRNA7P36544 502 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 ACSM6Q6P461 480 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 GCNT2Q8N0V5 402 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM147Q9BVK8 224 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 FAM234AQ9H0X4 552 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 PITPNC1Q9UKF7 332 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 USF3Q68DE3 2245 aa8.02□□□□□ -1.13
SYNE2-213ENST00000554805 TMEM30CPA0ZSE6 113 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms