RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 LFNGQ8NES3 379 aa17.14■□□□□ 0.33
GABRB3-206ENST00000554556 TSNAXQ99598 290 aaKnown RBP17.14■□□□□ 0.33
GABRB3-206ENST00000554556 STUB1Q9UNE7 303 aa17.14■□□□□ 0.33
GABRB3-206ENST00000554556 TRBV6-6A0A0A6YYG2 114 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 CPEP16870 476 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 CEACAM6P40199 344 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 LRRTM1Q86UE6 522 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 BPIFB6Q8NFQ5 453 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 AGMATQ9BSE5 352 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 NICN1Q9BSH3 213 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 FAM103A1Q9BTL3 118 aaKnown RBP17.13■□□□□ 0.33
GABRB3-206ENST00000554556 URM1Q9BTM9 101 aaKnown RBP17.13■□□□□ 0.33
GABRB3-206ENST00000554556 GAB2Q9UQC2 676 aa17.13■□□□□ 0.33
GABRB3-206ENST00000554556 EBAG9O00559 213 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 SPDEFO95238 335 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 BPNT1O95861 308 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 TRGV3P03979 118 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 SRMP19623 302 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 RPS16P62249 146 aaKnown RBP17.12■□□□□ 0.33
GABRB3-206ENST00000554556 INSL4Q14641 139 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 PSG5Q15238 335 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 ANKRD13BQ86YJ7 626 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 CITED4Q96RK1 184 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 C11orf54Q9H0W9 315 aaPredicted RBP17.12■□□□□ 0.33
GABRB3-206ENST00000554556 ZNF221Q9UK13 617 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 STAB2Q8WWQ8 2551 aa17.12■□□□□ 0.33
GABRB3-206ENST00000554556 TMEM14DPA8MWL7 114 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 LDLRAD4O15165 306 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 CA2P00918 260 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 ZP3P21754 424 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 HLA-DRB3P79483 266 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 UNC119Q13432 240 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 HSD17B12Q53GQ0 312 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 LAIR2Q6ISS4 152 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 TMED9Q9BVK6 235 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 MND1Q9BWT6 205 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 PARP12Q9H0J9 701 aaKnown RBP17.11■□□□□ 0.33
GABRB3-206ENST00000554556 RANGRFQ9HD47 186 aaPredicted RBP17.11■□□□□ 0.33
GABRB3-206ENST00000554556 ZNF355PQ9NSJ1 428 aa17.11■□□□□ 0.33
GABRB3-206ENST00000554556 CEACAM19Q7Z692 300 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 PDPNQ86YL7 162 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 SGPP2Q8IWX5 399 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 OR6M1Q8NGM8 313 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 PTX4Q96A99 478 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 RSRP1Q9BUV0 290 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 OR1A1Q9P1Q5 309 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 AK3Q9UIJ7 227 aa17.1■□□□□ 0.33
GABRB3-206ENST00000554556 A0A0G2JLM5 398 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 C13orf42A0A1B0GVH6 325 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 H3BUA1 57 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 APOA2P02652 100 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 GNAO1P09471 354 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 IGHV4-30-4P0DP06 118 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 CD37P11049 281 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 QRFPP83859 136 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 FXYD3Q14802 87 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 MOGAT2Q3SYC2 334 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 DRAXINQ8NBI3 349 aaPredicted RBP17.09■□□□□ 0.33
GABRB3-206ENST00000554556 FBLIM1Q8WUP2 373 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 TM2D3Q9BRN9 247 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 LPAR5Q9H1C0 372 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 KCNK15Q9H427 330 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 FKBP14Q9NWM8 211 aa17.09■□□□□ 0.33
GABRB3-206ENST00000554556 A8MZ25 164 aa17.08■□□□□ 0.32
GABRB3-206ENST00000554556 SOCS1O15524 211 aa17.08■□□□□ 0.32
GABRB3-206ENST00000554556 IGLV1-51P01701 117 aa17.08■□□□□ 0.32
GABRB3-206ENST00000554556 RNLSQ5VYX0 342 aa17.08■□□□□ 0.32
GABRB3-206ENST00000554556 GRPEL2Q8TAA5 225 aa17.08■□□□□ 0.32
GABRB3-206ENST00000554556 Q9N2K0 584 aa17.08■□□□□ 0.32
GABRB3-206ENST00000554556 HSF4Q9ULV5 492 aa17.08■□□□□ 0.32
GABRB3-206ENST00000554556 A0A0A6YYD4 124 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 CNIH1O95406 144 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 CDK1P06493 297 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 SCTP09683 121 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 Q8N1Y9 231 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 FAM89BQ8N5H3 189 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 ZNF383Q8NA42 475 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 POC5Q8NA72 575 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 TMEM68Q96MH6 324 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 HDHD3Q9BSH5 251 aaPredicted RBP17.07■□□□□ 0.32
GABRB3-206ENST00000554556 PLGRKTQ9HBL7 147 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 C12orf4Q9NQ89 552 aa17.07■□□□□ 0.32
GABRB3-206ENST00000554556 HUWE1Q7Z6Z7 4374 aaKnown RBP17.07■□□□□ 0.32
GABRB3-206ENST00000554556 SLC25A17O43808 307 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 PROP1O75360 226 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 IGKV1-16P04430 117 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 UCHL1P09936 223 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 ARSBP15848 533 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 RANBP1P43487 201 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 SPHARQ15513 63 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 OR5T1Q8NG75 326 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 ISOC1Q96CN7 298 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 CMSS1Q9BQ75 279 aaKnown RBP17.06■□□□□ 0.32
GABRB3-206ENST00000554556 SLC35D1Q9NTN3 355 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 C19orf73Q9NVV2 129 aa17.06■□□□□ 0.32
GABRB3-206ENST00000554556 H0Y980 276 aa17.05■□□□□ 0.32
GABRB3-206ENST00000554556 LGALS7P47929 136 aa17.05■□□□□ 0.32
GABRB3-206ENST00000554556 HAPLN4Q86UW8 402 aa17.05■□□□□ 0.32
GABRB3-206ENST00000554556 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.05■□□□□ 0.32
GABRB3-206ENST00000554556 LCE6AA0A183 80 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms