RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 WDR61Q9GZS3 305 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 FAM234AQ9H0X4 552 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 METTL1Q9UBP6 276 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 TTC28Q96AY4 2481 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 ICE1Q9Y2F5 2266 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 MAP1LC3B2A6NCE7 125 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 ST8SIA5O15466 376 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 SP5Q6BEB4 398 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 DPPA3Q6W0C5 159 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 Q6ZT83 130 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 COQ2Q96H96 371 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 MAP1LC3BQ9GZQ8 125 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 TMPRSS5Q9H3S3 457 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 SLC25A22Q9H936 323 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 CLCF1Q9UBD9 225 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 RNF212BA8MTL3 300 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 IGHV2-5P01817 119 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 COL10A1Q03692 680 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 C11orf53Q8IXP5 236 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 YPEL4Q96NS1 127 aa13.16□□□□□ -0.3
ARHGEF40-203ENST00000554514 CADP27708 2225 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 MAP1BP46821 2468 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 PIGBOS1A0A0B4J2F0 54 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 ODAMA1E959 279 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 ZG16O60844 167 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 DEFA4P12838 97 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 Q3ZCU0 254 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 FAM90A2PQ658T7 463 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 INO80CQ6PI98 192 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 TAF15Q92804 592 aaKnown RBP eCLIP13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 PSG11Q9UQ72 335 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 INTS1Q8N201 2190 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 S100A8P05109 93 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 PDZD11Q5EBL8 140 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 ARL6IP6Q8N6S5 226 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 OR13A1Q8NGR1 328 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 LHX4Q969G2 390 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 SLC39A9Q9NUM3 307 aa13.15□□□□□ -0.3
ARHGEF40-203ENST00000554514 IGKV1D-33P01593 117 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 IGKV1-33P01594 117 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 CECR9P0C854 216 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 MDKP21741 143 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 KIR2DL2P43627 348 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 TMEM41BQ5BJD5 291 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 WDR82Q6UXN9 313 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 ACP7Q6ZNF0 438 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 SPAARA0A1B0GVQ0 90 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 OOEPA6NGQ2 149 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 TMEM210A6NLX4 147 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 C4orf17Q53FE4 359 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 MALSU1Q96EH3 234 aa13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 OPN3Q9H1Y3 402 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-203ENST00000554514 SMIM6P0DI80 62 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 WDR31Q8NA23 367 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 LOXL4Q96JB6 756 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 CXXC4Q9H2H0 198 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 CISD1Q9NZ45 108 aaKnown RBP13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 DUSP13Q9UII6 198 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 J3QW42 95 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 ZNF737O75373 536 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 RD3LP0DJH9 198 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 WT1P19544 449 aaPredicted RBP13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 GCH1P30793 250 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 TFF3Q07654 80 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 CATR1Q13166 79 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 MSMO1Q15800 293 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 SLC35E3Q7Z769 313 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 RPP25LQ8N5L8 163 aaKnown RBP13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 DEFB124Q8NES8 71 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 SSX3Q99909 188 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 DMXL1Q9Y485 3027 aa13.13□□□□□ -0.31
ARHGEF40-203ENST00000554514 LINC00473A8K010 186 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 TRGC2P03986 189 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 FGF7P21781 194 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 BMP5P22003 454 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 EIF2S3P41091 472 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 BRWD1-AS2P59051 145 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 H2BFWTQ7Z2G1 175 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 OR2Z1Q8NG97 314 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 GATAD1Q8WUU5 269 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 LRRC29Q8WV35 223 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 PSMG3Q9BT73 122 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 LRRC30A6NM36 301 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 FABP1P07148 127 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 DTD1Q8TEA8 209 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 CA5BP1Q8WTZ4 195 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 RPUSD4Q96CM3 377 aaKnown RBP13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 HES4Q9HCC6 221 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 IGHV3OR15-7A0A075B7D8 119 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 LINC00587B1AMM8 73 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 ADIRFQ15847 76 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 ZNF610Q8N9Z0 462 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 NECAP1Q8NC96 275 aa13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.12□□□□□ -0.31
ARHGEF40-203ENST00000554514 A0A087WWC5 75 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms