RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CHST6Q9GZX3 395 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 IFT46Q9NQC8 304 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.13□□□□□ -1.27
TDP1-208ENST00000553989 GPR173Q9NS66 373 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 SERTAD4Q9NUC0 356 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 FAM206AQ9NX38 181 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 TBL2Q9Y4P3 447 aaKnown RBP7.13□□□□□ -1.27
TDP1-208ENST00000553989 A0A0U1RQV5 110 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 TMEM14DPA8MWL7 114 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 DHRS3O75911 302 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 KDM4BO94953 1096 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 SIX6O95475 246 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 DUS4LO95620 317 aaKnown RBP7.12□□□□□ -1.27
TDP1-208ENST00000553989 TTRP02766 147 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 TK1P04183 234 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 FGF2P09038 288 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 PGA5P0DJD9 388 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 ZBTB25P24278 435 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 ZNF93P35789 620 aaPredicted RBP7.12□□□□□ -1.27
TDP1-208ENST00000553989 ECI1P42126 302 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 EIF5AP63241 154 aaKnown RBP7.12□□□□□ -1.27
TDP1-208ENST00000553989 QRFPP83859 136 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 DHRS2Q13268 280 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 TMEM95Q3KNT9 176 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 KHDC1LQ5JSQ8 128 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 VAX1Q5SQQ9 334 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 ZNF660Q6AZW8 331 aaPredicted RBP7.12□□□□□ -1.27
TDP1-208ENST00000553989 C11orf87Q6NUJ2 197 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 FAAP20Q6NZ36 180 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 UQCC3Q6UW78 93 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 TRAPPC6BQ86SZ2 158 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 DYNAPQ8N1N2 210 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 ARRDC1Q8N5I2 433 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 BVESQ8NE79 360 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 PXT1Q8NFP0 134 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 OR56B1Q8NGI3 324 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 COQ8AQ8NI60 647 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 PIFOQ8TCI5 191 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 EDARADDQ8WWZ3 215 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 WDR89Q96FK6 387 aaPredicted RBP7.12□□□□□ -1.27
TDP1-208ENST00000553989 PDCD10Q9BUL8 212 aa7.12□□□□□ -1.27
TDP1-208ENST00000553989 TINAGL1Q9GZM7 467 aaPredicted RBP7.12□□□□□ -1.27
TDP1-208ENST00000553989 LOC105371267A0A1B0GV96 52 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 C9orf170A2RU37 121 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 A6NDX4 124 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 M0QYG6 137 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 BCL2L11O43521 198 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 ZNF728P0DKX0 622 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 IGLL1P15814 213 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 CCL1P22362 96 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 PSMB6P28072 239 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 COL10A1Q03692 680 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 EDDM3AQ14507 147 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 SCGB2B2Q4G0G5 96 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 C8orf86Q6ZUL3 223 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 TMED4Q7Z7H5 227 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 CALHM1Q8IU99 346 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 Q8N2B8 174 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 C11orf42Q8N5U0 333 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 OR4D10Q8NGI6 311 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 OR4D6Q8NGJ1 314 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 OR13C8Q8NGS7 320 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 OR4K15Q8NH41 348 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 LHFPL5Q8TAF8 219 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 ST8SIA2Q92186 375 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 MALSU1Q96EH3 234 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 ZNF714Q96N38 554 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 NRIP2Q9BQI9 281 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 NMES1Q9C002 83 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 SELENOIQ9C0D9 397 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 ANAPC10Q9UM13 185 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 TNFSF18Q9UNG2 199 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 HILPDAQ9Y5L2 63 aa7.11□□□□□ -1.27
TDP1-208ENST00000553989 NOTCH3Q9UM47 2321 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 FAM230AA0A1W2PPH8 454 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 FAM90A8PA6NJQ4 464 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 C17orf98A8MV24 154 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 ODF3BA8MYP8 253 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 HLA-AP01891 365 aaKnown RBP7.1□□□□□ -1.27
TDP1-208ENST00000553989 IGHV1-8P0DP01 117 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 BLCAPP62952 87 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 SURF2Q15527 256 aaPredicted RBP7.1□□□□□ -1.27
TDP1-208ENST00000553989 PAN3Q58A45 887 aaKnown RBP7.1□□□□□ -1.27
TDP1-208ENST00000553989 TMEM128Q5BJH2 165 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 DEFB121Q5J5C9 76 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 LY6G6FQ5SQ64 297 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 AWAT2Q6E213 333 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 EIF5AL1Q6IS14 154 aaKnown RBP7.1□□□□□ -1.27
TDP1-208ENST00000553989 GLIPR1L1Q6UWM5 242 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 HOGA1Q86XE5 327 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 FAM89BQ8N5H3 189 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 OR5AU1Q8NGC0 362 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 OR52N4Q8NGI2 321 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 OR51A2Q8NGJ7 313 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 PP6455Q8WZ26 134 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 RAB3CQ96E17 227 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 CPNE2Q96FN4 548 aaPredicted RBP7.1□□□□□ -1.27
TDP1-208ENST00000553989 CST11Q9H112 138 aa7.1□□□□□ -1.27
TDP1-208ENST00000553989 PCDHB16Q9NRJ7 776 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms