RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SMIM20Q8N5G0 67 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 PACRGLQ8N7B6 248 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 OR8S1Q8NH09 359 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 OR4X1Q8NH49 305 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 GRPEL2Q8TAA5 225 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 LHFPL5Q8TAF8 219 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 LINC01560Q8TB33 94 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 ITLN2Q8WWU7 325 aaPredicted RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 ACOT12Q8WYK0 555 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 L3HYPDHQ96EM0 354 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 NARS2Q96I59 477 aaKnown RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 OR2V2Q96R30 315 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 TBX5Q99593 518 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 CHCHD7Q9BUK0 85 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 GABARAPL1Q9H0R8 117 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 RNASE7Q9H1E1 156 aaKnown RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 ZNF355PQ9NSJ1 428 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 IDI2-AS1Q9NZ38 188 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 SS18L2Q9UHA2 77 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 ANAPC10Q9UM13 185 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 UFC1Q9Y3C8 167 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 FIS1Q9Y3D6 152 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 SETD1AO15047 1707 aaKnown RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 ARHGAP23Q9P227 1491 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 NPATQ14207 1427 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 ROCK1Q13464 1354 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 EIF3AQ14152 1382 aaKnown RBP1.47□□□□□ -2.17
SRP54-204ENST00000553923 CARMIL3Q8ND23 1372 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 MYO15BQ96JP2 1530 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 A0A096LNJ9 63 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 IGHV1-3A0A0C4DH29 117 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 FUOMA2VDF0 154 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 OR5H14A6NHG9 310 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 TSTD3H0UI37 97 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 TMEM250H0YL14 139 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 ZNF861PO60384 105 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 POP7O75817 140 aaKnown RBP1.47□□□□□ -2.17
SRP54-204ENST00000553923 S1PR2O95136 353 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 LTAP01374 205 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 TTRP02766 147 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 GYPCP04921 128 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 SMIM17P0DL12 118 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 INAFM2P0DMQ5 153 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 IDO1P14902 403 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 ELK1P19419 428 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 CCL1P22362 96 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 S100GP29377 79 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 ALDH3A1P30838 453 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 MPIP34949 423 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 OPRK1P41145 380 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 CXCL12P48061 93 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 RHOBP62745 196 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 GNG3P63215 75 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 ELF3P78545 371 aaPredicted RBP1.47□□□□□ -2.17
SRP54-204ENST00000553923 BSPH1Q075Z2 132 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 PDGFRLQ15198 375 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 DEFB116Q30KQ4 102 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 ZNF678Q5SXM1 525 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 C1orf174Q8IYL3 243 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 RNF175Q8N4F7 328 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 DEFB125Q8N687 156 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 ZNF676Q8N7Q3 588 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 FER1L6-AS1Q8NA97 138 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 OR10K1Q8NGX5 313 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 RAB2BQ8WUD1 216 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 SLC25A46Q96AG3 418 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 CNBD2Q96M20 576 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 KLF6Q99612 283 aaPredicted RBP1.47□□□□□ -2.17
SRP54-204ENST00000553923 SHANK2-AS3Q9BTD1 123 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 PBDC1Q9BVG4 233 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 TMEM147Q9BVK8 224 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 COMMD5Q9GZQ3 224 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 BIN3Q9NQY0 253 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 MED29Q9NX70 200 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 MRPL27Q9P0M9 148 aaKnown RBP1.47□□□□□ -2.17
SRP54-204ENST00000553923 RPS6KB2Q9UBS0 482 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 RSL24D1Q9UHA3 163 aaKnown RBP1.47□□□□□ -2.17
SRP54-204ENST00000553923 NDUFAF1Q9Y375 327 aa1.47□□□□□ -2.17
SRP54-204ENST00000553923 PCF11O94913 1555 aaKnown RBP1.47□□□□□ -2.17
SRP54-204ENST00000553923 CHD4Q14839 1912 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 LRRK1Q38SD2 2015 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 hCG_1818297A0A087WSY0 165 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 TRAV26-2A0A0B4J265 109 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 EXOC1LA0A1B0GW35 172 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 hADV38S2A0JD32 116 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 LINC00862A6NCI5 91 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 IZUMO1RA6ND01 250 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 OR4C45A6NMZ5 311 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 ZNF729A6NN14 1252 aaPredicted RBP1.46□□□□□ -2.18
SRP54-204ENST00000553923 A8MT66 165 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 LEUTXA8MZ59 168 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 G3V2T6 193 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 H3BSA7 217 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 FAAHO00519 579 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 ZNF207O43670 478 aaKnown RBP1.46□□□□□ -2.18
SRP54-204ENST00000553923 OR7C2O60412 319 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 GPR75O95800 540 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 MT-CO2P00403 227 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 HLA-DRB1P01911 266 aa1.46□□□□□ -2.18
SRP54-204ENST00000553923 OR5AC1P0C628 307 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms