RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 MMP23AO75900 390 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 IGKV1-5P01602 117 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 GNLYP22749 145 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 BRWD1-AS2P59051 145 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 UBA52P62987 128 aaKnown RBP10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 TFF3Q07654 80 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF816Q0VGE8 651 aaPredicted RBP10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 SMCO1Q147U7 214 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 C17orf58Q2M2W7 97 aa10.56□□□□□ -0.72
VIPAS39-206ENST00000553888 USP24Q9UPU5 2620 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 LINC00473A8K010 186 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 SSSCA1O60232 199 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 ADH4P08319 380 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 APOBEC3AP31941 199 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 LOXL3P58215 753 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 SRPXP78539 464 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 RPL7L1Q6DKI1 246 aaKnown RBP10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 C1orf229Q6ZS94 237 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 COMMD7Q86VX2 200 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 AGMATQ9BSE5 352 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 FAM234AQ9H0X4 552 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF665Q9H7R5 613 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 SDHAF2Q9NX18 166 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 CALYQ9NYX4 217 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNRD1Q9P1U0 126 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 LINC00862A6NCI5 91 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 C17orf98A8MV24 154 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 TMEM178BH3BS89 294 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 PROP1O75360 226 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 SNAPC5O75971 98 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 LY6HO94772 140 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 NDUFB7P17568 137 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 VDAC1P21796 283 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 S100GP29377 79 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 NUP62P37198 522 aaPredicted RBP10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 PAX5Q02548 391 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 TEX36Q5VZQ5 186 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 PPP1R35Q8TAP8 253 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 C14orf79Q96F83 325 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 CLUHP3Q96NS8 147 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 FBXL17Q9UF56 701 aa10.55□□□□□ -0.72
VIPAS39-206ENST00000553888 ST8SIA3O43173 380 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 CLDN14O95500 239 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 TMEM50AO95807 157 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 LOXP28300 417 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 NHLH2Q02577 135 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 EIF4EBP1Q13541 118 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 MORN2Q502X0 79 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 RPL39P5Q59GN2 51 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 RNASE11Q8TAA1 199 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 AKR1E2Q96JD6 320 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 TMEM106BQ9NUM4 274 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 ZFYVE26Q68DK2 2539 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 GPR37O15354 613 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 NFYBP25208 207 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 NKX2-1P43699 371 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 TMEM33P57088 247 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 SSX8Q7RTT4 187 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 MUC15Q8N387 334 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 EGLN1Q9GZT9 426 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 POMT1Q9Y6A1 747 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 ARHGAP32A7KAX9 2087 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 FAM24AA6NFZ4 105 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 LRRC30A6NM36 301 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 SIGLEC5O15389 551 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 CGB3P0DN86 165 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 CGB7P0DN87 165 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 MUC1P15941 1255 aaPredicted RBP10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 GZMHP20718 246 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 LPAR6P43657 344 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 AKR1C2P52895 323 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 TCTEX1D2Q8WW35 142 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 DIRC2Q96SL1 478 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 WFDC1Q9HC57 220 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 C19orf12Q9NSK7 152 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 CACNG5Q9UF02 275 aa10.54□□□□□ -0.72
VIPAS39-206ENST00000553888 PPIAL4EA0A075B759 164 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 PPIAL4DF5H284 164 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 PPIAL4FP0DN26 164 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 G6PCP35575 357 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 HTD2P86397 168 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF273Q14593 569 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 PRAMEF5Q5TYX0 476 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 PLEKHF2Q9H8W4 249 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 LIN7CQ9NUP9 197 aaKnown RBP10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 PPIAL4AQ9Y536 164 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 E5RGE8 158 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 H3BP45 60 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 LGALS8O00214 317 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 SLC25A17O43808 307 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 S1PR2O95136 353 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 CR1LQ2VPA4 569 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 ZNF672Q499Z4 452 aaPredicted RBP10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 TOLLIPQ9H0E2 274 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 CTSZQ9UBR2 303 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 NSG2Q9Y328 171 aa10.53□□□□□ -0.72
VIPAS39-206ENST00000553888 KRASP01116 189 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms