RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 MRPS7Q9Y2R9 242 aaKnown RBP18.15■□□□□ 0.5
TDP1-206ENST00000553569 SMIM31A0A1B0GVY4 71 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 J3QRK9 145 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 FGF16O43320 207 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 CTXN2P0C2S0 81 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 CT45A6P0DMU7 189 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 CT45A5P0DMU8 189 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 CT45A7P0DMV0 189 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 NFYAP23511 347 aaPredicted RBP18.14■□□□□ 0.49
TDP1-206ENST00000553569 CBX5P45973 191 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 DRAXINQ8NBI3 349 aaPredicted RBP18.14■□□□□ 0.49
TDP1-206ENST00000553569 CITED1Q99966 193 aa18.14■□□□□ 0.49
TDP1-206ENST00000553569 H3BMQ9 156 aa18.13■□□□□ 0.49
TDP1-206ENST00000553569 M0R1X1 148 aa18.13■□□□□ 0.49
TDP1-206ENST00000553569 CCDC160A6NGH7 325 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 F2RL1P55085 397 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 MMDQ15546 238 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 HIST2H2BDQ6DRA6 164 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 SNX29P2Q8IUI4 249 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 C11orf44Q8N8P7 122 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 Q8N9W7 124 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.12■□□□□ 0.49
TDP1-206ENST00000553569 DYNC2LI1Q8TCX1 351 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 SNAPC3Q92966 411 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 SDHAF2Q9NX18 166 aa18.12■□□□□ 0.49
TDP1-206ENST00000553569 CCDC59Q9P031 241 aaKnown RBP18.12■□□□□ 0.49
TDP1-206ENST00000553569 OR5H14A6NHG9 310 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 H0YJW9 148 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 H7C2Y5 167 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 PROP1O75360 226 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 PRSS3P35030 304 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 LINC00205P59089 165 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 ACTBP60709 375 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 C5orf30Q96GV9 206 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 RITA1Q96K30 269 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 PLSCR3Q9NRY6 295 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 CEPT1Q9Y6K0 416 aa18.11■□□□□ 0.49
TDP1-206ENST00000553569 RGS5O15539 181 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 HLA-DQB1P01920 261 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 CNTFRP26992 372 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 ZNF383Q8NA42 475 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 OR8H1Q8NGG4 311 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 RASL11BQ9BPW5 248 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 EXTL2Q9UBQ6 330 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 WASHC3Q9Y3C0 194 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 OR2W1Q9Y3N9 320 aa18.1■□□□□ 0.49
TDP1-206ENST00000553569 LUMP51884 338 aaPredicted RBP18.09■□□□□ 0.49
TDP1-206ENST00000553569 OR5AN1Q8NGI8 311 aa18.09■□□□□ 0.49
TDP1-206ENST00000553569 WNT10AQ9GZT5 417 aa18.09■□□□□ 0.49
TDP1-206ENST00000553569 LIN7CQ9NUP9 197 aaKnown RBP18.09■□□□□ 0.49
TDP1-206ENST00000553569 NECAP2Q9NVZ3 263 aa18.09■□□□□ 0.49
TDP1-206ENST00000553569 IGKV1D-13A0A0B4J2D9 117 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 APOA2P02652 100 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 IGKV1-13P0DP09 117 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 MC5RP33032 325 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 RNASE12Q5GAN4 147 aaKnown RBP18.08■□□□□ 0.48
TDP1-206ENST00000553569 SLC35E3Q7Z769 313 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 LAX1Q8IWV1 398 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 FAM71E2Q8N5Q1 922 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 SGMS2Q8NHU3 365 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 MIXL1Q9H2W2 232 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 ANAPC10Q9UM13 185 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 GAB2Q9UQC2 676 aa18.08■□□□□ 0.48
TDP1-206ENST00000553569 TET2Q6N021 2002 aaPredicted RBP18.08■□□□□ 0.48
TDP1-206ENST00000553569 CTDSP2O14595 271 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 NBR2O15453 112 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 OR5H8P0DN80 308 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 AADACP22760 399 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 FCGR2CP31995 323 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 ZNF645Q8N7E2 425 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 OR5AP2Q8NGF4 316 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 GPX8Q8TED1 209 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 SLC35D1Q9NTN3 355 aa18.07■□□□□ 0.48
TDP1-206ENST00000553569 FBXO24O75426 580 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 TUSC2O75896 110 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 CD28P10747 220 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 CDK10Q15131 360 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 CENPVQ7Z7K6 275 aaPredicted RBP18.06■□□□□ 0.48
TDP1-206ENST00000553569 SCPEP1Q9HB40 452 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 EHFQ9NZC4 300 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 KIAA1456Q9P272 454 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 LINC00527Q9UJ94 153 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 ADAM30Q9UKF2 790 aa18.06■□□□□ 0.48
TDP1-206ENST00000553569 IGHG2P01859 326 aa18.05■□□□□ 0.48
TDP1-206ENST00000553569 PMP2P02689 132 aa18.05■□□□□ 0.48
TDP1-206ENST00000553569 WIPF2Q8TF74 440 aaPredicted RBP18.05■□□□□ 0.48
TDP1-206ENST00000553569 NOL4LQ96MY1 436 aaPredicted RBP18.05■□□□□ 0.48
TDP1-206ENST00000553569 HSPB9Q9BQS6 159 aa18.05■□□□□ 0.48
TDP1-206ENST00000553569 C6orf62Q9GZU0 229 aaPredicted RBP18.05■□□□□ 0.48
TDP1-206ENST00000553569 RBM38Q9H0Z9 239 aaKnown RBP18.05■□□□□ 0.48
TDP1-206ENST00000553569 LINC01548A6NM66 108 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 RBBP9O75884 186 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 IGKV1-16P04430 117 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 THBS3P49746 956 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 FXYD4P59646 89 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 C10orf99Q6UWK7 81 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 PDPNQ86YL7 162 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 FOXRED2Q8IWF2 684 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 OR5AU1Q8NGC0 362 aa18.04■□□□□ 0.48
TDP1-206ENST00000553569 OR5H2Q8NGV7 314 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 214.4 ms