RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 MOB3AQ96BX8 217 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 ABHD14BQ96IU4 210 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 SCGB3A2Q96PL1 93 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 MS4A7Q9GZW8 240 aaPredicted RBP7.91□□□□□ -1.14
TMEM260-204ENST00000553335 OR2D2Q9H210 308 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 SLC2A8Q9NY64 477 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 DPM3Q9P2X0 92 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 RNF150Q9ULK6 438 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 GAB2Q9UQC2 676 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 MINOS1-NBL1R4GNA1 71 aa7.91□□□□□ -1.14
TMEM260-204ENST00000553335 IGHV3OR16-10A0A075B7F0 116 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 OR5H14A6NHG9 310 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 OOSP1A8MZH6 123 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 PLA2G10O15496 165 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 TXNL1O43396 289 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 S100GP29377 79 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 ARHGDIBP52566 201 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 UCP3P55916 312 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 ASAH1Q13510 395 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 DCTN2Q13561 401 aaKnown RBP7.9□□□□□ -1.14
TMEM260-204ENST00000553335 MSMO1Q15800 293 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 KLF17Q5JT82 389 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-204ENST00000553335 UTF1Q5T230 341 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 FAM71F2Q6NXP2 309 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 BRD3OSQ6XYD6 125 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 IDO2Q6ZQW0 420 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 SLC38A6Q8IZM9 456 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-204ENST00000553335 ZBTB34Q8NCN2 500 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 ZFAND1Q8TCF1 268 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 MALSU1Q96EH3 234 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 AKR1E2Q96JD6 320 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 SLC25A21Q9BQT8 299 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-204ENST00000553335 AGMATQ9BSE5 352 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 BEX2Q9BXY8 128 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 SLC5A7Q9GZV3 580 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 PARP12Q9H0J9 701 aaKnown RBP7.9□□□□□ -1.14
TMEM260-204ENST00000553335 FXYD6Q9H0Q3 95 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 IFI27L2Q9H2X8 130 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 DPAGT1Q9H3H5 408 aa7.9□□□□□ -1.14
TMEM260-204ENST00000553335 FLNAP21333 2647 aaKnown RBP7.9□□□□□ -1.15
TMEM260-204ENST00000553335 ABCA1O95477 2261 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 SAA2-SAA4A0A096LPE2 208 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 IGKV1D-13A0A0B4J2D9 117 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 HSD17B6O14756 317 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 FSHBP01225 129 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 GAPDHP04406 335 aaKnown RBP7.89□□□□□ -1.15
TMEM260-204ENST00000553335 FBP1P09467 338 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 SAA2P0DJI9 122 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-204ENST00000553335 IGKV1-13P0DP09 117 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 PGAM2P15259 253 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 SAA4P35542 130 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 ZNF137PP52743 207 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 IFITM3Q01628 133 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 ZNF816Q0VGE8 651 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-204ENST00000553335 RBMS2Q15434 407 aaKnown RBP7.89□□□□□ -1.15
TMEM260-204ENST00000553335 SURF2Q15527 256 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-204ENST00000553335 TPTE2P1Q5T6R2 138 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 AADACL3Q5VUY0 350 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 RUSC1-AS1Q66K80 236 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 CCDC144NLQ6NUI1 221 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 ZNF833PQ6ZTB9 187 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 LHFPL4Q7Z7J7 247 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 TGIF2LXQ8IUE1 241 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 ODF3L1Q8IXM7 274 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 CMTM1Q8IZ96 169 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 POC5Q8NA72 575 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 MARCH1Q8TCQ1 289 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 RNF141Q8WVD5 230 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 RPEQ96AT9 228 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 ZNF486Q96H40 463 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-204ENST00000553335 CCL28Q9NRJ3 127 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 SDHAF2Q9NX18 166 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 ZNRD1Q9P1U0 126 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 CDC42EP3Q9UKI2 254 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 C14orf166Q9Y224 244 aaKnown RBP7.89□□□□□ -1.15
TMEM260-204ENST00000553335 FAM96BQ9Y3D0 163 aa7.89□□□□□ -1.15
TMEM260-204ENST00000553335 FAM240BA0A1B0GVZ2 78 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 GPR31O00270 319 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 CTSDP07339 412 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-204ENST00000553335 GNRHRP30968 328 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 THBS3P49746 956 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 CCR6P51684 374 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 SSX2Q16385 188 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 ABCA11PQ4W5N1 156 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 ZNF66Q6ZN08 573 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 C9orf139Q6ZV77 190 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 IL17RELQ6ZVW7 336 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 DRAM1Q8N682 238 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 ZDHHC22Q8N966 263 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 CCDC71LQ8N9Z2 235 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 OR13C8Q8NGS7 320 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 ENKURQ8TC29 256 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 RTN4IP1Q8WWV3 396 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-204ENST00000553335 ST6GALNAC6Q969X2 333 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 COPZ2Q9P299 210 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 TBC1D24Q9ULP9 559 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 GPR132Q9UNW8 380 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 HILPDAQ9Y5L2 63 aa7.88□□□□□ -1.15
TMEM260-204ENST00000553335 A0A0U1RQK1 487 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms