RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SHANK3Q9BYB0 1731 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 DLC1Q96QB1 1528 aa3.15□□□□□ -1.9
USP44-208ENST00000552440 LRRK1Q38SD2 2015 aa3.15□□□□□ -1.9
USP44-208ENST00000552440 BORCS7-ASMTA0A0B4J1R7 106 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 IGHV2-26A0A0B4J1V2 119 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 C9orf170A2RU37 121 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 SIGLEC16A6NMB1 481 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 DUS4LO95620 317 aaKnown RBP3.15□□□□□ -1.91
USP44-208ENST00000552440 LGALS1P09382 135 aaKnown RBP3.15□□□□□ -1.91
USP44-208ENST00000552440 CPMP14384 443 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 CCL1P22362 96 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 EMP1P54849 157 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 PIGPP57054 158 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 UBE2NP61088 152 aaKnown RBP3.15□□□□□ -1.91
USP44-208ENST00000552440 SNRPD2P62316 118 aaKnown RBP3.15□□□□□ -1.91
USP44-208ENST00000552440 MEF2CQ06413 473 aaPredicted RBP3.15□□□□□ -1.91
USP44-208ENST00000552440 BAMBIQ13145 260 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 ERCC8Q13216 396 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 FCN2Q15485 313 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 PRR4Q16378 134 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 FAM53AQ6NSI3 398 aaPredicted RBP3.15□□□□□ -1.91
USP44-208ENST00000552440 ATP5L2Q7Z4Y8 100 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 C11orf53Q8IXP5 236 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 MBD3L1Q8WWY6 194 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 ZNF524Q96C55 264 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 SERPINI1Q99574 410 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 LRRC61Q9BV99 259 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 TMEM147Q9BVK8 224 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 SLCO1B3Q9NPD5 702 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 HSPB8Q9UJY1 196 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 POMPQ9Y244 141 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 TRPM2O94759 1503 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 CCDC141Q6ZP82 1450 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 FYCO1Q9BQS8 1478 aa3.15□□□□□ -1.91
USP44-208ENST00000552440 ADGRB2O60241 1585 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 ABCC5O15440 1437 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 IGKV1-27A0A075B6S5 117 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 OR5H14A6NHG9 310 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 KNCNA6PVL3 124 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 SS18L1O75177 396 aaPredicted RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 LYPLA1O75608 230 aaPredicted RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 NDUFC2O95298 119 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 FABP3P05413 133 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 MPC1LP0DKB6 136 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 RRAS2P62070 204 aaPredicted RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 ELF3P78545 371 aaPredicted RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 EGFEM1PQ0D2K5 195 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 ADIGQ0VDE8 80 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 DAZ2Q13117 558 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 ARFRP1Q13795 201 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 OR8B8Q15620 311 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 GRK1Q15835 563 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 KCNJ8Q15842 424 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 CLLU1OSQ5K130 101 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 DNAJC24Q6P3W2 148 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 C19orf48Q6RUI8 117 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 AGTRAPQ6RW13 159 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 H2AFVQ71UI9 128 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 STRADAQ7RTN6 431 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 DAZ4Q86SG3 579 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 KLHDC8BQ8IXV7 354 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 OR13C4Q8NGS5 318 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 LMO3Q8TAP4 145 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 GPR119Q8TDV5 335 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 THEM6Q8WUY1 208 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 DCAKDQ8WVC6 231 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 CANT1Q8WVQ1 401 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 KLK6Q92876 244 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 PDXPQ96GD0 296 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 KCNS1Q96KK3 526 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 LYSMD1Q96S90 227 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 TMEM243Q9BU79 118 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 DOHHQ9BU89 302 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 TMEM70Q9BUB7 260 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 EIF5A2Q9GZV4 153 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 OR52D1Q9H346 318 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 SLC25A22Q9H936 323 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 ZNF702PQ9H963 129 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 HMG20AQ9NP66 347 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 DAZ1Q9NQZ3 744 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 KLF13Q9Y2Y9 288 aaPredicted RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 RBM7Q9Y580 266 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 C2orf16Q68DN1 1984 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 EHBP1L1Q8N3D4 1523 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 NRKQ7Z2Y5 1582 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 SMG6Q86US8 1419 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 CASKIN1Q8WXD9 1431 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 TMEM189A5PLL7 270 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 EPOPA6NHQ4 379 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 ISLRO14498 428 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 UBBP0CG47 229 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 COX7A1P24310 79 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 POLR2IP36954 125 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 MDH2P40926 338 aaKnown RBP3.14□□□□□ -1.91
USP44-208ENST00000552440 MP68P56378 58 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 DEFA1P59665 94 aa3.14□□□□□ -1.91
USP44-208ENST00000552440 RPS20P60866 119 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms