RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 FGF8P55075 233 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-208ENST00000551691 OR2B6P58173 313 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF121P58317 390 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-208ENST00000551691 TAS2R39P59534 338 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 SLC35A2P78381 396 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF117Q03924 483 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 REG3AQ06141 175 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 TMEM255AQ5JRV8 349 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 OR2T5Q6IEZ7 315 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 SLC48A1Q6P1K1 146 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 MED27Q6P2C8 311 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ASCL4Q6XD76 172 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 TEX43Q6ZNM6 134 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 TMPPEQ6ZT21 453 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 CCDC121Q6ZUS5 278 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 CAMK2N1Q7Z7J9 78 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 LRRC28Q86X40 367 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-208ENST00000551691 SLC30A8Q8IWU4 369 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ZFP41Q8N8Y5 198 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 OR51G1Q8NGK1 321 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 OR2T29Q8NH02 315 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 OR4S2Q8NH73 311 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 OR6X1Q8NH79 312 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 CACNG8Q8WXS5 425 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 RORBQ92753 470 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 CREB3L1Q96BA8 519 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 TM4SF18Q96CE8 201 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ARL5BQ96KC2 179 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ATOH8Q96SQ7 321 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 UQCC2Q9BRT2 126 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 PARP12Q9H0J9 701 aaKnown RBP2.69□□□□□ -1.98
LIMA1-208ENST00000551691 SYT4Q9H2B2 425 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 SDHAF2Q9NX18 166 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 TAS2R13Q9NYV9 303 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 VAPAQ9P0L0 249 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 OR5V1Q9UGF6 321 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF107Q9UII5 783 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-208ENST00000551691 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 DNAH6Q9C0G6 4158 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 TRAV8-7A0A075B6U6 113 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 IGHV1-69DA0A0B4J2H0 117 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 NCBP2LA6PVI3 153 aaKnown RBP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 ERI2A8K979 691 aaKnown RBP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 CEACAM18A8MTB9 384 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 GMDSO60547 372 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 SC5DO75845 299 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 GABARAPO95166 117 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 IGHV1-69P01742 117 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 IGHV1-46P01743 117 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 BGLAPP02818 100 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 GLAP06280 429 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 NQO2P16083 231 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 PFN2P35080 140 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 TALDO1P37837 337 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 EIF1P41567 113 aaKnown RBP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 KCNJ3P48549 501 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 VEGFCP49767 419 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 NCBP2P52298 156 aaKnown RBP eCLIP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 AQP5P55064 265 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 C2orf54Q08AI8 447 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 DGCR6Q14129 220 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 FCN2Q15485 313 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 MAPRE2Q15555 327 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 TAL2Q16559 108 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 TTMPQ5BVD1 217 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 FAM201AQ5SY85 155 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 RSBN1Q5VWQ0 802 aaPredicted RBP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF774Q6NX45 483 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 LYPD2Q6UXB3 125 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 LINC00173Q6ZV60 143 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 AAED1Q7RTV5 226 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 CALHM3Q86XJ0 350 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 OR51A7Q8NH64 312 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 SUN5Q8TC36 379 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 LGALS14Q8TCE9 139 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 ACTRT1Q8TDG2 376 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 C17orf50Q8WW18 174 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 C1orf54Q8WWF1 131 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 EXOSC8Q96B26 276 aaKnown RBP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 ISOC1Q96CN7 298 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 SGTBQ96EQ0 304 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF75AQ96N20 296 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF317Q96PQ6 595 aaPredicted RBP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 TSNAXQ99598 290 aaKnown RBP2.68□□□□□ -1.98
LIMA1-208ENST00000551691 RBBP8Q99708 897 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 EFCAB11Q9BUY7 163 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 REEP1Q9H902 201 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 NANOGQ9H9S0 305 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 SLC25A37Q9NYZ2 338 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 EMC3Q9P0I2 261 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 VPREB3Q9UKI3 123 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 ATP6V1DQ9Y5K8 247 aa2.68□□□□□ -1.98
LIMA1-208ENST00000551691 IGHV3-64DA0A0J9YX35 117 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 A0A1B0GVY2 172 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 TVP23AA6NH52 213 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 H7C1H1 209 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 UPK1AO00322 258 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 GPR171O14626 319 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 HDAC3O15379 428 aa2.67□□□□□ -1.98
LIMA1-208ENST00000551691 STK16O75716 305 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms