RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 IGHV3-11P01762 117 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 IGHV4-30-4P0DP06 118 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 ZP3P21754 424 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 HTR2CP28335 458 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 TPPP2P59282 170 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 PSG5Q15238 335 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 MOGAT2Q3SYC2 334 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 GLT8D1Q68CQ7 371 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 SGPP2Q8IWX5 399 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 Q8N1Y9 231 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 DHRSXQ8N5I4 330 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 MS4A15Q8N5U1 240 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 LFNGQ8NES3 379 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 CASTOR1Q8WTX7 329 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 PTX4Q96A99 478 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 TSNAXQ99598 290 aaKnown RBP9.87□□□□□ -0.83
PTCH1-221ENST00000550914 CHMP1AQ9HD42 196 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-221ENST00000550914 RANGRFQ9HD47 186 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-221ENST00000550914 PLCXD1Q9NUJ7 323 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 C19orf73Q9NVV2 129 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 METTL1Q9UBP6 276 aaKnown RBP9.87□□□□□ -0.83
PTCH1-221ENST00000550914 PSORS1C1Q9UIG5 152 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 GAB2Q9UQC2 676 aa9.87□□□□□ -0.83
PTCH1-221ENST00000550914 A0A0G2JLM5 398 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 TMEM14DPA8MWL7 114 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 BPNT1O95861 308 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 CD37P11049 281 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 ZBTB25P24278 435 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 VEGFCP49767 419 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 QRFPP83859 136 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 UNC119Q13432 240 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 SRSF7Q16629 238 aaKnown RBP eCLIP9.86□□□□□ -0.83
PTCH1-221ENST00000550914 ACSM3Q53FZ2 586 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 OR10K2Q6IF99 312 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 GLDNQ6ZMI3 551 aaPredicted RBP9.86□□□□□ -0.83
PTCH1-221ENST00000550914 LRRTM1Q86UE6 522 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 ANKRD13BQ86YJ7 626 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 NANOGP1Q8N7R0 232 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 ISOC1Q96CN7 298 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 ABHD14BQ96IU4 210 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 FAM103A1Q9BTL3 118 aaKnown RBP9.86□□□□□ -0.83
PTCH1-221ENST00000550914 PARP12Q9H0J9 701 aaKnown RBP9.86□□□□□ -0.83
PTCH1-221ENST00000550914 PLEKHJ1Q9NW61 149 aa9.86□□□□□ -0.83
PTCH1-221ENST00000550914 BRI3O95415 125 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 CA2P00918 260 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 TRGV3P03979 118 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 CPEP16870 476 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 CEACAM6P40199 344 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 PDPNQ86YL7 162 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 C8orf59Q8N0T1 100 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-221ENST00000550914 POC5Q8NA72 575 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 FBLIM1Q8WUP2 373 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 TMEM68Q96MH6 324 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 MS4A10Q96PG2 267 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 NICN1Q9BSH3 213 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 C11orf54Q9H0W9 315 aaPredicted RBP9.85□□□□□ -0.83
PTCH1-221ENST00000550914 EDA2RQ9HAV5 297 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 HSF4Q9ULV5 492 aa9.85□□□□□ -0.83
PTCH1-221ENST00000550914 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
PTCH1-221ENST00000550914 C13orf42A0A1B0GVH6 325 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 H0Y980 276 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 PROP1O75360 226 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 APOA2P02652 100 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 SRMP19623 302 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 RPS16P62249 146 aaKnown RBP9.84□□□□□ -0.83
PTCH1-221ENST00000550914 HLA-DRB3P79483 266 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 KLF5Q13887 457 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-221ENST00000550914 FXYD3Q14802 87 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 RBM48Q5RL73 367 aaKnown RBP9.84□□□□□ -0.83
PTCH1-221ENST00000550914 RNLSQ5VYX0 342 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 LAIR2Q6ISS4 152 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 AHSA2Q719I0 299 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 FAM89BQ8N5H3 189 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.84□□□□□ -0.83
PTCH1-221ENST00000550914 OR6M1Q8NGM8 313 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 SETD6Q8TBK2 473 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 CLCC1Q96S66 551 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 SPATA25Q9BR10 227 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 URM1Q9BTM9 101 aaKnown RBP9.84□□□□□ -0.83
PTCH1-221ENST00000550914 FKBP14Q9NWM8 211 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 OR1A1Q9P1Q5 309 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 ZNF221Q9UK13 617 aa9.84□□□□□ -0.83
PTCH1-221ENST00000550914 A0A0A6YYD4 124 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 LGALS7P47929 136 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 INSL4Q14641 139 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 ZNF383Q8NA42 475 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 RSRP1Q9BUV0 290 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 MND1Q9BWT6 205 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 LPAR5Q9H1C0 372 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 Q9N2K0 584 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 C12orf4Q9NQ89 552 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 SIGLEC8Q9NYZ4 499 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 AK3Q9UIJ7 227 aa9.83□□□□□ -0.84
PTCH1-221ENST00000550914 FOXI3A8MTJ6 420 aaPredicted RBP9.82□□□□□ -0.84
PTCH1-221ENST00000550914 SLC25A17O43808 307 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 GNAO1P09471 354 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 UCHL1P09936 223 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 AADACP22760 399 aa9.82□□□□□ -0.84
PTCH1-221ENST00000550914 SERPINB10P48595 397 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms