RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 MOGAT2Q3SYC2 334 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 CD300EQ496F6 205 aaPredicted RBP7.9□□□□□ -1.14
VPS29-208ENST00000550267 RPL39P5Q59GN2 51 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 KRTAP5-3Q6L8H2 238 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 ZNF562Q6V9R5 426 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 AMIGO2Q86SJ2 522 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 SYS1Q8N2H4 156 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 OR2AK2Q8NG84 335 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 OR2K2Q8NGT1 345 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 GRPEL2Q8TAA5 225 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 LGALS12Q96DT0 336 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 MRPL48Q96GC5 212 aaKnown RBP7.9□□□□□ -1.14
VPS29-208ENST00000550267 YPEL2Q96QA6 119 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 TMEM138Q9NPI0 162 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 IMPAD1Q9NX62 359 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 KCNIP1Q9NZI2 227 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 PEF1Q9UBV8 284 aaKnown RBP7.9□□□□□ -1.14
VPS29-208ENST00000550267 SLC23A1Q9UHI7 598 aa7.9□□□□□ -1.14
VPS29-208ENST00000550267 A0A0G2JLM5 398 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 NUPR2A6NF83 97 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 OR5H14A6NHG9 310 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 OR11H12B2RN74 326 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 H0YJW9 148 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 H3BUA1 57 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 H7C2Y5 167 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 SC5DO75845 299 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 BDKRB2P30411 391 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 GTF2A1P52655 376 aaPredicted RBP7.89□□□□□ -1.15
VPS29-208ENST00000550267 GBX2P52951 348 aaPredicted RBP7.89□□□□□ -1.15
VPS29-208ENST00000550267 PPP3R1P63098 170 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 EWSR1Q01844 656 aaKnown RBP eCLIP7.89□□□□□ -1.15
VPS29-208ENST00000550267 TAGLNQ01995 201 aaKnown RBP7.89□□□□□ -1.15
VPS29-208ENST00000550267 RPEL1Q2QD12 228 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 DMKNQ6E0U4 476 aaPredicted RBP7.89□□□□□ -1.15
VPS29-208ENST00000550267 FAM71F2Q6NXP2 309 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 CEMP1Q6PRD7 247 aaPredicted RBP7.89□□□□□ -1.15
VPS29-208ENST00000550267 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 BVESQ8NE79 360 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 MRPL30Q8TCC3 161 aaKnown RBP7.89□□□□□ -1.15
VPS29-208ENST00000550267 GATAD1Q8WUU5 269 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 ZNF184Q99676 751 aaPredicted RBP7.89□□□□□ -1.15
VPS29-208ENST00000550267 OVOL2Q9BRP0 275 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 SLC2A8Q9NY64 477 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 AASSQ9UDR5 926 aa7.89□□□□□ -1.15
VPS29-208ENST00000550267 SLC22A1O15245 554 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 CA11O75493 328 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 RBBP9O75884 186 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 CD2P06729 351 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 MC5RP33032 325 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 MRPL28Q13084 256 aaKnown RBP7.88□□□□□ -1.15
VPS29-208ENST00000550267 GPR176Q14439 515 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 FXYD3Q14802 87 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 LY6G6FQ5SQ64 297 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 ZNF343Q6P1L6 599 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 ZNF554Q86TJ5 538 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 LAX1Q8IWV1 398 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 GPR148Q8TDV2 347 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 TRUB1Q8WWH5 349 aaKnown RBP7.88□□□□□ -1.15
VPS29-208ENST00000550267 MUL1Q969V5 352 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 PARP12Q9H0J9 701 aaKnown RBP7.88□□□□□ -1.15
VPS29-208ENST00000550267 BANF2Q9H503 90 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 ERVK13-1Q9NX77 482 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 PIPOXQ9P0Z9 390 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 WASHC3Q9Y3C0 194 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 GMPPBQ9Y5P6 360 aa7.88□□□□□ -1.15
VPS29-208ENST00000550267 RYR1P21817 5038 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 A0A0J9YWU9 116 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 RAB29O14966 203 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 OR2A4O95047 310 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 AADACP22760 399 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 FASP25445 335 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 SNRPGP62308 76 aaKnown RBP7.87□□□□□ -1.15
VPS29-208ENST00000550267 SSBP2P81877 361 aaPredicted RBP7.87□□□□□ -1.15
VPS29-208ENST00000550267 GUCA2BQ16661 112 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 SLC25A30Q5SVS4 291 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 MEDAGQ5VYS4 303 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 XAF1Q6GPH4 301 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 SIGIRRQ6IA17 410 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 GLIPR1L1Q6UWM5 242 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 OR5AN1Q8NGI8 311 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 GHSRQ92847 366 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 GALMQ96C23 342 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 ABHD14BQ96IU4 210 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 MYCBPQ99417 103 aaPredicted RBP7.87□□□□□ -1.15
VPS29-208ENST00000550267 SELENOIQ9C0D9 397 aa7.87□□□□□ -1.15
VPS29-208ENST00000550267 TINAGL1Q9GZM7 467 aaPredicted RBP7.87□□□□□ -1.15
VPS29-208ENST00000550267 SAC3D1A6NKF1 404 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 H3BNX3 289 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 GYG2O15488 501 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 AIREO43918 545 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 RBMXL2O75526 392 aaKnown RBP7.86□□□□□ -1.15
VPS29-208ENST00000550267 GPX5O75715 221 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 SPDEFO95238 335 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 BAG2O95816 211 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 IGFBP3P17936 291 aaPredicted RBP7.86□□□□□ -1.15
VPS29-208ENST00000550267 EDN2P20800 178 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 FUT3P21217 361 aa7.86□□□□□ -1.15
VPS29-208ENST00000550267 RPS16P62249 146 aaKnown RBP7.86□□□□□ -1.15
VPS29-208ENST00000550267 RIPK1Q13546 671 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms