RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 OR52E5Q8NH55 327 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 UBALD1Q8TB05 177 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 Q8TCH9 128 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 DTD1Q8TEA8 209 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 FAM222BQ8WU58 562 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 TAF15Q92804 592 aaKnown RBP eCLIP7.47□□□□□ -1.21
TMEM116-209ENST00000550020 SDSLQ96GA7 329 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 S1PR3Q99500 378 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 ZNF251Q9BRH9 671 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 SCRT1Q9BWW7 348 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 KCNIP2Q9NS61 270 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 DNAH14Q0VDD8 3507 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 PRUNE2Q8WUY3 3088 aa7.47□□□□□ -1.21
TMEM116-209ENST00000550020 MYO7BQ6PIF6 2116 aa7.46□□□□□ -1.21
TMEM116-209ENST00000550020 A0A087WWC5 75 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 ZNF729A6NN14 1252 aaPredicted RBP7.46□□□□□ -1.22
TMEM116-209ENST00000550020 MARCH11A6NNE9 402 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 C9JQL5 133 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SPRY3O43610 288 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 MPDU1O75352 247 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 S1PR2O95136 353 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SNRNP70P08621 437 aaKnown RBP7.46□□□□□ -1.22
TMEM116-209ENST00000550020 CD40P25942 277 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SSTR5P35346 364 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 THBS3P49746 956 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 EDDM3BP56851 147 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SPCS3P61009 180 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 GNB2P62879 340 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 RUNX1Q01196 453 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 PNRC1Q12796 327 aaPredicted RBP7.46□□□□□ -1.22
TMEM116-209ENST00000550020 AARDQ4LEZ3 155 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 MORN2Q502X0 79 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SMUG1Q53HV7 270 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 ZNF787Q6DD87 383 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 ALKBH2Q6NS38 261 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SPSB3Q6PJ21 355 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 VHLLQ6RSH7 139 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SLC35E3Q7Z769 313 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 C1orf87Q8N0U7 546 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 OR10A7Q8NGE5 316 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 OR4A16Q8NH70 328 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 OR4S2Q8NH73 311 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 CLDND2Q8NHS1 167 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 ITLN1Q8WWA0 313 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 R3HDM4Q96D70 268 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 RAB39BQ96DA2 213 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 GGACTQ9BVM4 153 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 EGLN1Q9GZT9 426 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 ZNF665Q9H7R5 613 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 SIRT7Q9NRC8 400 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 CALYQ9NYX4 217 aa7.46□□□□□ -1.22
TMEM116-209ENST00000550020 CISD1Q9NZ45 108 aaKnown RBP7.46□□□□□ -1.22
TMEM116-209ENST00000550020 LAMA1P25391 3075 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 KBTBD11-OT1A0A1B0GTJ5 212 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 LOC102723971A0A1B0GUV8 181 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 hADV38S2A0JD32 116 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 CXorf65A6NEN9 183 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 C17orf98A8MV24 154 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 M0R1X1 148 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 GPR37O15354 613 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 RAMP3O60896 148 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 WISP2O76076 250 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 F12P00748 615 aaPredicted RBP7.45□□□□□ -1.22
TMEM116-209ENST00000550020 IFNA17P01571 189 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 IFNA4P05014 189 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 CD55P08174 381 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 SRP19P09132 144 aaKnown RBP7.45□□□□□ -1.22
TMEM116-209ENST00000550020 OR13C7P0DN81 318 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 NQO2P16083 231 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 EGR1P18146 543 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 DUTP33316 252 aaKnown RBP7.45□□□□□ -1.22
TMEM116-209ENST00000550020 RAB13P51153 203 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 RPL30P62888 115 aaKnown RBP7.45□□□□□ -1.22
TMEM116-209ENST00000550020 HAGHQ16775 308 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 VWC2Q2TAL6 325 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 PRAMEF5Q5TYX0 476 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 BTNL3Q6UXE8 466 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 ZNF295-AS1Q8N0V1 137 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 RFESDQ8TAC1 157 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 TVP23CQ96ET8 276 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 OR4C12Q96R67 309 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 AGMATQ9BSE5 352 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 ACTR3CQ9C0K3 210 aaPredicted RBP7.45□□□□□ -1.22
TMEM116-209ENST00000550020 GAL3ST2Q9H3Q3 398 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 SLC39A9Q9NUM3 307 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 CLN8Q9UBY8 286 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 VAX2Q9UIW0 290 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 AHCTF1Q8WYP5 2266 aa7.45□□□□□ -1.22
TMEM116-209ENST00000550020 GPR179Q6PRD1 2367 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 TRAV38-1A0A0B4J264 116 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 UBE2L5PA0A1B0GUS4 154 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 COLCA2A8K830 154 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 C3orf80F5H4A9 247 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 H3BQ15 152 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 CYB5BO43169 146 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 TGOLN2O43493 480 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 FCGR3BO75015 233 aa7.44□□□□□ -1.22
TMEM116-209ENST00000550020 HRASP01112 189 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms