RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 Q6ZQT7 251 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 ATP5L2Q7Z4Y8 100 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 STX12Q86Y82 276 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 LRRC34Q8IZ02 419 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 Q8WTZ3 238 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 ABHD14BQ96IU4 210 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 C9orf16Q9BUW7 83 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 OR51I1Q9H343 314 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 OR51I2Q9H344 312 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 ATPIF1Q9UII2 106 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 RPUSD1Q9UJJ7 312 aaKnown RBP1.6□□□□□ -2.15
CCDC38-208ENST00000549876 FIS1Q9Y3D6 152 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 LSM5Q9Y4Y9 91 aaKnown RBP1.6□□□□□ -2.15
CCDC38-208ENST00000549876 PCYT1BQ9Y5K3 369 aaPredicted RBP1.6□□□□□ -2.15
CCDC38-208ENST00000549876 ICOSQ9Y6W8 199 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 TTC21AQ8NDW8 1320 aa1.6□□□□□ -2.15
CCDC38-208ENST00000549876 YLPM1P49750 1951 aaKnown RBP1.59□□□□□ -2.15
CCDC38-208ENST00000549876 CHD2O14647 1828 aaKnown RBP1.59□□□□□ -2.15
CCDC38-208ENST00000549876 IGKV1-12A0A0C4DH73 117 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 EVPLLA8MZ36 301 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 DISC1C4P0D8 188 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 C4orf51C9J302 202 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 H3BMM0 161 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 H3BQ85 93 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 K7EQS6 105 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 MRASO14807 208 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 OR5F1O95221 314 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 IGKV1D-12P01611 117 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 TRGV3P03979 118 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 OR5G3P0C626 314 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 ALOX5APP20292 161 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 HSD11B1P28845 292 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 GABRA3P34903 492 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 LINC00313P59037 77 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 FGF12P61328 243 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 VBP1P61758 197 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 RANP62826 216 aaKnown RBP1.59□□□□□ -2.15
CCDC38-208ENST00000549876 HERVK_113P63121 156 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 DR1Q01658 176 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 TSPAN31Q12999 210 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 JOSD1Q15040 202 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-208ENST00000549876 PDGFRLQ15198 375 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 LDLRAD2Q5SZI1 272 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 ZNF550Q7Z398 422 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 LYZL2Q7Z4W2 148 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 SGPP2Q8IWX5 399 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 ZNF567Q8N184 647 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 C1orf158Q8N1D5 194 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 UBL4BQ8N7F7 174 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 BPIFB6Q8NFQ5 453 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 OR5B17Q8NGF7 314 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 UBE2WQ96B02 151 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 MS4A6EQ96DS6 147 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 ANKRD36BP1Q96IX9 119 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 SEC22CQ9BRL7 303 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 KCNIP2Q9NS61 270 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 DHCR7Q9UBM7 475 aaKnown RBP1.59□□□□□ -2.15
CCDC38-208ENST00000549876 VPS29Q9UBQ0 182 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 ZNF230Q9UIE0 474 aaPredicted RBP1.59□□□□□ -2.15
CCDC38-208ENST00000549876 DNAJC12Q9UKB3 198 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 MRPS16Q9Y3D3 137 aaKnown RBP1.59□□□□□ -2.15
CCDC38-208ENST00000549876 LINC00588Q9Y4M8 146 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 MMACHCQ9Y4U1 282 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 PHLDA3Q9Y5J5 127 aa1.59□□□□□ -2.15
CCDC38-208ENST00000549876 TRIP11Q15643 1979 aa1.59□□□□□ -2.16
CCDC38-208ENST00000549876 KIF15Q9NS87 1388 aa1.59□□□□□ -2.16
CCDC38-208ENST00000549876 MYO16Q9Y6X6 1858 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 PLCH2O75038 1416 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 ADGRL3Q9HAR2 1447 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 TICRRQ7Z2Z1 1910 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 TRBV24-1A0A075B6N3 115 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 SH2D1AO60880 128 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 MT-CO2P00403 227 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 IGHV3-53P01767 116 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 TNNC2P02585 160 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 REG1AP05451 166 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 PFN1P07737 140 aaKnown RBP1.58□□□□□ -2.16
CCDC38-208ENST00000549876 CD7P09564 240 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 CD36P16671 472 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 OR10J1P30954 320 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 REG1BP48304 166 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 MARCKSL1P49006 195 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 GDI2P50395 445 aaKnown RBP1.58□□□□□ -2.16
CCDC38-208ENST00000549876 AKR1C2P52895 323 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 CTBP2P56545 445 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 B2MP61769 119 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 GLO1Q04760 184 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 BIKQ13323 160 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 APOFQ13790 326 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 SPA17Q15506 151 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 C10orf91Q5T1B1 145 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 ADM2Q7Z4H4 148 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 LRRC25Q8N386 305 aaPredicted RBP1.58□□□□□ -2.16
CCDC38-208ENST00000549876 OR11G2Q8NGC1 345 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 CD200R1Q8TD46 325 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 OR5P3Q8WZ94 311 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 SLC35B4Q969S0 331 aa1.58□□□□□ -2.16
CCDC38-208ENST00000549876 CPNE2Q96FN4 548 aaPredicted RBP1.58□□□□□ -2.16
CCDC38-208ENST00000549876 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.58□□□□□ -2.16
CCDC38-208ENST00000549876 FKBP14Q9NWM8 211 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms