RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 IQCJQ1A5X6 159 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 GBGT1Q8N5D6 347 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 LIN7CQ9NUP9 197 aaKnown RBP11.6□□□□□ -0.55
HDAC7-228ENST00000548938 TIMM9Q9Y5J7 89 aa11.6□□□□□ -0.55
HDAC7-228ENST00000548938 C1QTNF9BB2RNN3 333 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 PAGE4O60829 102 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 TYMSP04818 313 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 FOXG1P55316 489 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 RPS16P62249 146 aaKnown RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 PMP22Q01453 160 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 OR10G9Q8NGN4 311 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 OR10G7Q8NGN6 311 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 ANAPC16Q96DE5 110 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 THOC3Q96J01 351 aaKnown RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 STRADBQ9C0K7 418 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 FRYQ5TBA9 3013 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 NTN3O00634 580 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 CYC1P08574 325 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 CISD2Q8N5K1 135 aaKnown RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 AURKAIP1Q9NWT8 199 aaPredicted RBP11.59□□□□□ -0.55
HDAC7-228ENST00000548938 LRP5LA4QPB2 252 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 RHBDL1O75783 438 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 SCGB1D1O95968 90 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 P04436 131 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 NPPCP23582 126 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 IL3RAP26951 378 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 CCKARP32238 428 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 TFF3Q07654 80 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 FFAR4Q5NUL3 377 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 FAM78BQ5VT40 261 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 FAM58AQ8N1B3 248 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 FGFRL1Q8N441 504 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 AGBL5Q8NDL9 886 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 OR5A2Q8NGI9 324 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 MANBALQ9NQG1 85 aa11.59□□□□□ -0.55
HDAC7-228ENST00000548938 TNRC6AQ8NDV7 1962 aaKnown RBP11.58□□□□□ -0.56
HDAC7-228ENST00000548938 NPIPB11E5RHQ5 1161 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 SP9P0CG40 484 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 EGR1P18146 543 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 BMP5P22003 454 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 SRP14P37108 136 aaKnown RBP11.58□□□□□ -0.56
HDAC7-228ENST00000548938 LINC00596Q86U02 117 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 NEIL1Q96FI4 390 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-228ENST00000548938 FKBP11Q9NYL4 201 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 CLN8Q9UBY8 286 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 POLR3KQ9Y2Y1 108 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-228ENST00000548938 SOX15O60248 233 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 DUSP3P51452 185 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-228ENST00000548938 CYB5R2Q6BCY4 276 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 TMEM256Q8N2U0 113 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 DRAM1Q8N682 238 aa11.58□□□□□ -0.56
HDAC7-228ENST00000548938 APOBEC3DQ96AK3 386 aaPredicted RBP11.58□□□□□ -0.56
HDAC7-228ENST00000548938 MRPL33O75394 65 aaKnown RBP11.57□□□□□ -0.56
HDAC7-228ENST00000548938 OR51B6Q9H340 312 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 SIRPB1O00241 398 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 RAMP3O60896 148 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 CCL4P13236 92 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 MPLP40238 635 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 RPL15P61313 204 aaKnown RBP11.57□□□□□ -0.56
HDAC7-228ENST00000548938 KCNIP4Q6PIL6 250 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 TMEM147Q9BVK8 224 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 ARRDC1-AS1Q9H2J1 176 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 R4GN57 208 aa11.57□□□□□ -0.56
HDAC7-228ENST00000548938 C11orf94C9JXX5 98 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 FAM90A26D6RGX4 464 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 NUPR1O60356 82 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 VENTXO95231 258 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 CRYAAP02489 173 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 COX5BP10606 129 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 ERVFC1-1P60608 527 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 IL11RAQ14626 422 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 DEPPQ9NTK1 212 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 TRAPPC2LQ9UL33 140 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 ESPL1Q14674 2120 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 KIR2DL5BA0A0G2JN68 375 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 KIR2DL5BA0A0G2JPC4 375 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 M0R143 59 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 SS18L1O75177 396 aaPredicted RBP11.56□□□□□ -0.56
HDAC7-228ENST00000548938 KRASP01116 189 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 GDF1P27539 372 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 G6PCP35575 357 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 WNT5AP41221 380 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 C1orf194Q5T5A4 169 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 Q6P435 159 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 LINC01551Q86U37 167 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 KIR2DL5AQ8N109 375 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 NPCDR1Q9BY65 106 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 HSPB7Q9UBY9 170 aa11.56□□□□□ -0.56
HDAC7-228ENST00000548938 A0A0U1RQK1 487 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 ZNF320A2RRD8 509 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 PINLYPA6NC86 204 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 MLNRO43193 412 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 COX5AP20674 150 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 TDGF1P3P51864 188 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 PPP1CBP62140 327 aa11.55□□□□□ -0.56
HDAC7-228ENST00000548938 NRN1LQ496H8 165 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms