RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 RAB12Q6IQ22 244 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 ZNF491Q8N8L2 437 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 TMEM104Q8NE00 496 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 OR8H1Q8NGG4 311 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 OR13A1Q8NGR1 328 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 OR1N2Q8NGR9 330 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 ADAT3Q96EY9 351 aaPredicted RBP10.5□□□□□ -0.73
CDX2-202ENST00000548877 THAP7Q9BT49 309 aaPredicted RBP10.5□□□□□ -0.73
CDX2-202ENST00000548877 GHRLQ9UBU3 117 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 TBC1D24Q9ULP9 559 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 A0A0B4J203 849 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 METTL21EPA6NDL7 271 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 H3BSH0 61 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 GABARAPH6UMI1 98 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 XRCC3O43542 346 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 VDAC1P21796 283 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 CD1BP29016 333 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 PPIFP30405 207 aaKnown RBP10.49□□□□□ -0.73
CDX2-202ENST00000548877 ATXN7L3Q14CW9 347 aaPredicted RBP10.49□□□□□ -0.73
CDX2-202ENST00000548877 C2orf76Q3KRA6 126 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 ZNF57Q68EA5 555 aaPredicted RBP10.49□□□□□ -0.73
CDX2-202ENST00000548877 LINC00311Q8N616 119 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 C8orf31Q8N9H6 132 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 ENKURQ8TC29 256 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 SMIM4Q8WVI0 70 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 LEAP2Q969E1 77 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 ST6GALNAC6Q969X2 333 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 SLC25A38Q96DW6 304 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 S1PR3Q99500 378 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 RAB22AQ9UL26 194 aa10.49□□□□□ -0.73
CDX2-202ENST00000548877 MRPS7Q9Y2R9 242 aaKnown RBP10.49□□□□□ -0.73
CDX2-202ENST00000548877 hCG_2014768A0A024R1R8 64 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 OVOL1O14753 267 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 DEGS1O15121 323 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 LYRM1O43325 122 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 IGHV3-7P01780 117 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 ZNF93P35789 620 aaPredicted RBP10.48□□□□□ -0.73
CDX2-202ENST00000548877 GLP1RP43220 463 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 BCAP31P51572 246 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 CLDN12P56749 244 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 SSBP1Q04837 148 aaKnown RBP10.48□□□□□ -0.73
CDX2-202ENST00000548877 DYRK1AQ13627 763 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 MOB3BQ86TA1 216 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 OR13C9Q8NGT0 318 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 OR10X1Q8NGY0 326 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 FCAMRQ8WWV6 532 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 DCUN1D4Q92564 292 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 ABHD1Q96SE0 405 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 RASL11BQ9BPW5 248 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 HSPB9Q9BQS6 159 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 GNB4Q9HAV0 340 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 TAS2R8Q9NYW2 309 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 COPZ2Q9P299 210 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 KIF25Q9UIL4 384 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 VSIG4Q9Y279 399 aa10.48□□□□□ -0.73
CDX2-202ENST00000548877 ALMS1Q8TCU4 4167 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 MEIKINA0A087WXM9 373 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 FAM240BA0A1B0GVZ2 78 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 FAM90A10PA6NDY2 464 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 SULT1C2O00338 296 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 JTBO76095 146 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 MOSP00540 346 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 IGLV1-40P01703 118 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 KCNJ3P48549 501 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 GNG10P50151 68 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 TAS2R20P59543 309 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 GNB1P62873 340 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 RSBN1Q5VWQ0 802 aaPredicted RBP10.47□□□□□ -0.73
CDX2-202ENST00000548877 ELP2Q6IA86 826 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 LYPD6Q86Y78 171 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 Q8N1Y9 231 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 TOMM5Q8N4H5 51 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 OR51A2Q8NGJ7 313 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 OR52M1Q8NGK5 317 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 TRIM63Q969Q1 353 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 KLK15Q9H2R5 256 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 ING3Q9NXR8 418 aa10.47□□□□□ -0.73
CDX2-202ENST00000548877 IGHV3-72A0A0B4J1Y9 119 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 TRAV24A0A0B4J272 114 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 TMEM272A0A1B0GTI8 110 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 NAP1L6A6NFF2 107 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 ZP1P60852 638 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 AWAT2Q6E213 333 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 ACSM6Q6P461 480 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 PLET1Q6UQ28 207 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 NRARPQ7Z6K4 114 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 DUSP18Q8NEJ0 188 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 RFESDQ8TAC1 157 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 KCNG3Q8TAE7 436 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 RTN4IP1Q8WWV3 396 aaPredicted RBP10.46□□□□□ -0.73
CDX2-202ENST00000548877 FAM46BQ96A09 425 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 GPER1Q99527 375 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 C11orf54Q9H0W9 315 aaPredicted RBP10.46□□□□□ -0.73
CDX2-202ENST00000548877 ATG5Q9H1Y0 275 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 OR51J1Q9H342 316 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 SCPEP1Q9HB40 452 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 TPSG1Q9NRR2 321 aa10.46□□□□□ -0.73
CDX2-202ENST00000548877 PLA2G10O15496 165 aa10.45□□□□□ -0.74
CDX2-202ENST00000548877 SAP30O75446 220 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms