RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 OR5AN1Q8NGI8 311 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 OR8U1Q8NH10 309 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 GIMAP1Q8WWP7 306 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 RNF5Q99942 180 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 ZNF747Q9BV97 191 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 MRPL20Q9BYC9 149 aaKnown RBP11.55□□□□□ -0.56
DDX54-203ENST00000546869 MMP27Q9H306 513 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 IFT46Q9NQC8 304 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 RNF150Q9ULK6 438 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 MOB4Q9Y3A3 225 aa11.55□□□□□ -0.56
DDX54-203ENST00000546869 ZNF736B4DX44 427 aaPredicted RBP11.54□□□□□ -0.56
DDX54-203ENST00000546869 AMY1AP04745 511 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 AMY2AP04746 511 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 OR5H8P0DN80 308 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 LUMP51884 338 aaPredicted RBP11.54□□□□□ -0.56
DDX54-203ENST00000546869 BLCAPP62952 87 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 MRPS10P82664 201 aaKnown RBP11.54□□□□□ -0.56
DDX54-203ENST00000546869 TAGLNQ01995 201 aaKnown RBP11.54□□□□□ -0.56
DDX54-203ENST00000546869 HES1Q14469 280 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 CDK10Q15131 360 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 MSMO1Q15800 293 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 DHRS11Q6UWP2 260 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 OVCH2Q7RTZ1 564 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 LYSMD2Q8IV50 215 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 LAX1Q8IWV1 398 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 MCFD2Q8NI22 146 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 TAF15Q92804 592 aaKnown RBP eCLIP11.54□□□□□ -0.56
DDX54-203ENST00000546869 ABHD1Q96SE0 405 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 ZNF702PQ9H963 129 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 PLSCR3Q9NRY6 295 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 SDHAF2Q9NX18 166 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 RNF114Q9Y508 228 aa11.54□□□□□ -0.56
DDX54-203ENST00000546869 IGHV3-72A0A0B4J1Y9 119 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 CTDSPLO15194 276 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 RBBP9O75884 186 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 NFYAP23511 347 aaPredicted RBP11.53□□□□□ -0.56
DDX54-203ENST00000546869 PROK1P58294 105 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 TAS2R46P59540 309 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 SSBP1Q04837 148 aaKnown RBP11.53□□□□□ -0.56
DDX54-203ENST00000546869 SNX29P2Q8IUI4 249 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 ZNF645Q8N7E2 425 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 OR2T6Q8NHC8 308 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 DIRAS2Q96HU8 199 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 SOSTQ9BQB4 213 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 C6orf62Q9GZU0 229 aaPredicted RBP11.53□□□□□ -0.56
DDX54-203ENST00000546869 OR2D2Q9H210 308 aa11.53□□□□□ -0.56
DDX54-203ENST00000546869 RBM7Q9Y580 266 aaKnown RBP11.53□□□□□ -0.56
DDX54-203ENST00000546869 DPPA5A6NC42 116 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 MEIS3P1A6NDR6 274 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 H0YJW9 148 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 FCGR2CP31995 323 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 TNFSF8P32971 234 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 RCVRNP35243 200 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 DYRK1AQ13627 763 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 HNF4GQ14541 408 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 PYHIN1Q6K0P9 492 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 C3orf56Q8N813 242 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 NPBQ8NG41 125 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 ADTRPQ96IZ2 230 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 MTFP1Q9UDX5 166 aa11.52□□□□□ -0.57
DDX54-203ENST00000546869 ZNF107Q9UII5 783 aaPredicted RBP11.52□□□□□ -0.57
DDX54-203ENST00000546869 STAB1Q9NY15 2570 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 GABARAPH6UMI1 98 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 IGLV2-14P01704 120 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 ACTBP60709 375 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 ZNF660Q6AZW8 331 aaPredicted RBP11.51□□□□□ -0.57
DDX54-203ENST00000546869 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 FAM71E2Q8N5Q1 922 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 ZNF383Q8NA42 475 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 ZBTB34Q8NCN2 500 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 FCAMRQ8WWV6 532 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 DCUN1D5Q9BTE7 237 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 SERTAD4Q9NUC0 356 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 LIN7CQ9NUP9 197 aaKnown RBP11.51□□□□□ -0.57
DDX54-203ENST00000546869 WASHC3Q9Y3C0 194 aa11.51□□□□□ -0.57
DDX54-203ENST00000546869 IGKV1D-13A0A0B4J2D9 117 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 M0R1X1 148 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 PPYP01298 95 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 IGKV1-13P0DP09 117 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 RRASP10301 218 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 TBPP20226 339 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 DUTP33316 252 aaKnown RBP11.5□□□□□ -0.57
DDX54-203ENST00000546869 RFX2P48378 723 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 THBS3P49746 956 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 ABCA11PQ4W5N1 156 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 ACTBL2Q562R1 376 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 VAX1Q5SQQ9 334 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 Q8N9W7 124 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 OR5H2Q8NGV7 314 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 OR52I2Q8NH67 350 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 DDB2Q92466 427 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 BORCS5Q969J3 196 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 C5orf30Q96GV9 206 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 WNT10AQ9GZT5 417 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 KLK11Q9UBX7 282 aa11.5□□□□□ -0.57
DDX54-203ENST00000546869 RBMX2Q9Y388 322 aaKnown RBP11.5□□□□□ -0.57
DDX54-203ENST00000546869 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms