RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CEACAM1P13688 526 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 CBLN1P23435 193 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 FABP6P51161 128 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 TIPARPQ7Z3E1 657 aaKnown RBP12.44□□□□□ -0.42
HOXC11-202ENST00000546378 LHFPL4Q7Z7J7 247 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 OR1L1Q8NH94 360 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 FAM122AQ96E09 287 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 SGK494Q96LW2 274 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 TRAPPC1Q9Y5R8 145 aa12.44□□□□□ -0.42
HOXC11-202ENST00000546378 hCG_38984A0A1B0GV85 526 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 LOC102725191A0A1B0GVB3 256 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 NAPSAO96009 420 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 CYB5R3P00387 301 aaPredicted RBP12.43□□□□□ -0.42
HOXC11-202ENST00000546378 HBG1P69891 147 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 HBG2P69892 147 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 DPPA3Q6W0C5 159 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 REC114Q7Z4M0 266 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 NHLRC2Q8NBF2 726 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 FGF23Q9GZV9 251 aaPredicted RBP12.43□□□□□ -0.42
HOXC11-202ENST00000546378 DEPPQ9NTK1 212 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 NUPR1O60356 82 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 GYPAP02724 150 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 TCTAP57738 103 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 ZNF506Q5JVG8 444 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 Q6ZVH6 145 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 BAGE3Q86Y29 109 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 BAGE2Q86Y30 109 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 MS4A10Q96PG2 267 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 TBX15Q96SF7 602 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 YLPM1P49750 1951 aaKnown RBP12.43□□□□□ -0.42
HOXC11-202ENST00000546378 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 MT-CO3P00414 261 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 IFNA1P01562 189 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 CELA3BP08861 270 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 PMCHP20382 165 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 MAGEA5P43359 124 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 RAC1P63000 192 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 HIST1H3AP68431 136 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 MEF2BQ02080 365 aaPredicted RBP12.43□□□□□ -0.42
HOXC11-202ENST00000546378 PLPPR1Q8TBJ4 325 aa12.43□□□□□ -0.42
HOXC11-202ENST00000546378 A0A1B0GU03 582 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 C11orf94C9JXX5 98 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 LYZL6O75951 148 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 UMODP07911 640 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 PCOLCEQ15113 449 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 TEX38Q6PEX7 206 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 FGFRL1Q8N441 504 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 CNEP1R1Q8N9A8 125 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 GTF3AQ92664 365 aaKnown RBP12.42□□□□□ -0.42
HOXC11-202ENST00000546378 NINJ1Q92982 152 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 RAB24Q969Q5 203 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 ANGPTL4Q9BY76 406 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 FOXJ2Q9P0K8 574 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 IGLV3-12A0A075B6K2 115 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 OR6C6A6NF89 314 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 CBR3O75828 277 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 TNFSF15O95150 251 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 IFI6P09912 130 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 ACP1P24666 158 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 TRIP6Q15654 476 aaKnown RBP12.42□□□□□ -0.42
HOXC11-202ENST00000546378 MRPL14Q6P1L8 145 aaKnown RBP12.42□□□□□ -0.42
HOXC11-202ENST00000546378 C6orf15Q6UXA7 325 aaPredicted RBP12.42□□□□□ -0.42
HOXC11-202ENST00000546378 OR2T10Q8NGZ9 312 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 SGMS2Q8NHU3 365 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 LYPD6BQ8NI32 183 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 BTF3L4Q96K17 158 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 ZDHHC11Q9H8X9 412 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 RPH3ALQ9UNE2 315 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 KLF7O75840 302 aaPredicted RBP12.42□□□□□ -0.42
HOXC11-202ENST00000546378 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
HOXC11-202ENST00000546378 SIRT7Q9NRC8 400 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 VAX2Q9UIW0 290 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 ANAPC10Q9UM13 185 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 PSG11Q9UQ72 335 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 OR2W1Q9Y3N9 320 aa12.42□□□□□ -0.42
HOXC11-202ENST00000546378 KIR2DS1A0A191URI9 304 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 RRP8O43159 456 aaKnown RBP12.41□□□□□ -0.42
HOXC11-202ENST00000546378 IGKV1-5P01602 117 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 PMELP40967 661 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 KIR2DS4P43632 304 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 RPL23P62829 140 aaKnown RBP12.41□□□□□ -0.42
HOXC11-202ENST00000546378 IL24Q13007 206 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 FXYD3Q14802 87 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 KIR2DS1Q14954 304 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 HAPLN4Q86UW8 402 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 PITPNC1Q9UKF7 332 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 AGFG2O95081 481 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 S1PR2O95136 353 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 FOSL1P15407 271 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 GCH1P30793 250 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 RAC3P60763 192 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 OR2Y1Q8NGV0 311 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 OR2V1Q8NHB1 315 aa12.41□□□□□ -0.42
HOXC11-202ENST00000546378 CT55Q8WUE5 264 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms