RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RBM14Q96PK6 669 aaKnown RBP16.38■□□□□ 0.21
HMGA2-211ENST00000545998 MTFP1Q9UDX5 166 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 RBM7Q9Y580 266 aaKnown RBP16.38■□□□□ 0.21
HMGA2-211ENST00000545998 DNHD1Q96M86 4753 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 TMEM89A2RUT3 159 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 FABP12A6NFH5 140 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 PMP2P02689 132 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 CT45A6P0DMU7 189 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 CT45A5P0DMU8 189 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 CT45A7P0DMV0 189 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 HLA-DMAP28067 261 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 FCGR2CP31995 323 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 S100A5P33763 92 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 RFX2P48378 723 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 C16orf82Q7Z2V1 217 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 OR5H2Q8NGV7 314 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 SDHAF2Q9NX18 166 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 EHFQ9NZC4 300 aa16.38■□□□□ 0.21
HMGA2-211ENST00000545998 IGKV1D-13A0A0B4J2D9 117 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 OR2F2O95006 317 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 NDUFA7O95182 113 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 IGKV1-13P0DP09 117 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 AADACP22760 399 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 HRH1P35367 487 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 LUMP51884 338 aaPredicted RBP16.37■□□□□ 0.21
HMGA2-211ENST00000545998 ACTBP60709 375 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 DYRK1AQ13627 763 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 HES1Q14469 280 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 SMIM4Q8WVI0 70 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 GIMAP1Q8WWP7 306 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 C5orf30Q96GV9 206 aa16.37■□□□□ 0.21
HMGA2-211ENST00000545998 J3QRK9 145 aa16.36■□□□□ 0.21
HMGA2-211ENST00000545998 RBBP9O75884 186 aa16.36■□□□□ 0.21
HMGA2-211ENST00000545998 TMEM11P17152 192 aa16.36■□□□□ 0.21
HMGA2-211ENST00000545998 CCDC190Q86UF4 302 aa16.36■□□□□ 0.21
HMGA2-211ENST00000545998 Q8N6K4 173 aa16.36■□□□□ 0.21
HMGA2-211ENST00000545998 RBMXL1Q96E39 390 aaKnown RBP16.36■□□□□ 0.21
HMGA2-211ENST00000545998 EAF1Q96JC9 268 aaPredicted RBP16.36■□□□□ 0.21
HMGA2-211ENST00000545998 SLC25A33Q9BSK2 321 aa16.36■□□□□ 0.21
HMGA2-211ENST00000545998 RAG2P55895 527 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 HNF4GQ14541 408 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 ZNF660Q6AZW8 331 aaPredicted RBP16.35■□□□□ 0.21
HMGA2-211ENST00000545998 DHRS11Q6UWP2 260 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 FAM131AQ6UXB0 335 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 Q6ZSV7 163 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 ZNF645Q8N7E2 425 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 OR6Q1Q8NGQ2 317 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 OR2T10Q8NGZ9 312 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 BATF3Q9NR55 127 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 V9GYH0 126 aa16.35■□□□□ 0.21
HMGA2-211ENST00000545998 M0R1X1 148 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 GSTZ1O43708 216 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-211ENST00000545998 TSPAN9O75954 239 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 MOSP00540 346 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 PPYP01298 95 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 IGLV2-14P01704 120 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 SSBP1Q04837 148 aaKnown RBP16.34■□□□□ 0.21
HMGA2-211ENST00000545998 GLDNQ6ZMI3 551 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-211ENST00000545998 DRAXINQ8NBI3 349 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-211ENST00000545998 OR5AN1Q8NGI8 311 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 AKR1E2Q96JD6 320 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 NPFFR1Q9GZQ6 430 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 RBMX2Q9Y388 322 aaKnown RBP16.34■□□□□ 0.21
HMGA2-211ENST00000545998 H0YJW9 148 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 SLC22A5O76082 557 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 COMPP49747 757 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-211ENST00000545998 LINC00205P59089 165 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 FOXL1Q12952 345 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 ZNF383Q8NA42 475 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 OR4F5Q8NH21 305 aa16.34■□□□□ 0.21
HMGA2-211ENST00000545998 RANBP3Q9H6Z4 567 aaPredicted RBP16.34■□□□□ 0.21
HMGA2-211ENST00000545998 OR5H14A6NHG9 310 aa16.33■□□□□ 0.2
HMGA2-211ENST00000545998 AMY1AP04745 511 aa16.33■□□□□ 0.2
HMGA2-211ENST00000545998 AMY2AP04746 511 aa16.33■□□□□ 0.2
HMGA2-211ENST00000545998 ACTBL2Q562R1 376 aa16.33■□□□□ 0.2
HMGA2-211ENST00000545998 VAX1Q5SQQ9 334 aa16.33■□□□□ 0.2
HMGA2-211ENST00000545998 ZNF2Q9BSG1 426 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-211ENST00000545998 C16orf95Q9H693 158 aa16.33■□□□□ 0.2
HMGA2-211ENST00000545998 ZNF107Q9UII5 783 aaPredicted RBP16.33■□□□□ 0.2
HMGA2-211ENST00000545998 MOB4Q9Y3A3 225 aa16.33■□□□□ 0.2
HMGA2-211ENST00000545998 CD3DP04234 171 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 TBPP20226 339 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 PTBP1P26599 531 aaKnown RBP eCLIP16.32■□□□□ 0.26e-14■■■□□ 18.3
HMGA2-211ENST00000545998 MC5RP33032 325 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 ETV6P41212 452 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 BLCAPP62952 87 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 CNPY1Q3B7I2 92 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 TMEM229BQ8NBD8 167 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 OR4C13Q8NGP0 309 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 SECTM1Q8WVN6 248 aa16.32■□□□□ 0.2
HMGA2-211ENST00000545998 M0QYG6 137 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 MDKP21741 143 aaPredicted RBP16.31■□□□□ 0.2
HMGA2-211ENST00000545998 FXYD4P59646 89 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 ZNF79Q15937 498 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 AWAT1Q58HT5 328 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 SPANXN2Q5MJ10 180 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 OR6F1Q8NGZ6 308 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 MOB3AQ96BX8 217 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 RITA1Q96K30 269 aa16.31■□□□□ 0.2
HMGA2-211ENST00000545998 TINAGL1Q9GZM7 467 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms