RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, human

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-215	ENST00000544504	C4orf46	Q504U0	113 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	ZNF66	Q6ZN08	573 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	C5orf24	Q7Z6I8	188 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	C11orf42	Q8N5U0	333 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	BVES	Q8NE79	360 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	OR11H6	Q8NGC7	330 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	OR10X1	Q8NGY0	326 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	MRGPRF	Q96AM1	343 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	TMEM186	Q96B77	213 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	HSD17B10	Q99714	261 aa	Known RBP	7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	RTBDN	Q9BSG5	229 aa	Predicted RBP	7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	SIRPD	Q9H106	197 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	C5orf66	Q9H5L9	145 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	LPAR2	Q9HBW0	351 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	CCL28	Q9NRJ3	127 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	SLC2A9	Q9NRM0	540 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	FAM212B	Q9NTI7	297 aa	Predicted RBP	7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	LIN7C	Q9NUP9	197 aa	Known RBP	7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	MGAM2	Q2M2H8	2515 aa		7.77	□□□□□ -1.17
YBX3-215	ENST00000544504	IGKV1D-13	A0A0B4J2D9	117 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	CRYM-AS1	A6NIL9	109 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	HSD17B6	O14756	317 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	ST8SIA5	O15466	376 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	TXNL1	O43396	289 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	CREBL2	O60519	120 aa	Predicted RBP	7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	MMP23A	O75900	390 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	OR4E1	P0C645	316 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	IGKV1-13	P0DP09	117 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	AKR1C4	P17516	323 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	VAMP1	P23763	118 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	KIR2DS2	P43631	304 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	GNG10	P50151	68 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	ZNF137P	P52743	207 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	TAGLN	Q01995	201 aa	Known RBP	7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	PAX8	Q06710	450 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	TATDN3	Q17R31	274 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	CT45A1	Q5HYN5	189 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	CYB5R2	Q6BCY4	276 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	GLDN	Q6ZMI3	551 aa	Predicted RBP	7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	LYG2	Q86SG7	212 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	DRAM1	Q8N682	238 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504		Q8N7P7	452 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	CT45A3	Q8NHU0	189 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	CD300LF	Q8TDQ1	290 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	AGMAT	Q9BSE5	352 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	IFI27L2	Q9H2X8	130 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	MMP26	Q9NRE1	261 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	FLVCR2	Q9UPI3	526 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	PRELID3B	Q9Y3B1	194 aa		7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	YLPM1	P49750	1951 aa	Known RBP	7.76	□□□□□ -1.17
YBX3-215	ENST00000544504	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	CR1	P17927	2039 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	C7orf66	A4D0T2	115 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	OOSP1	A8MZH6	123 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	MPPED1	O15442	326 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	PGLYRP1	O75594	196 aa	Predicted RBP	7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	DUS4L	O95620	317 aa	Known RBP	7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	IGLV1-47	P01700	117 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	HLA-A	P01891	365 aa	Known RBP	7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	ANXA7	P20073	488 aa	Known RBP	7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	EPHA1	P21709	976 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	HTR1D	P28221	377 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	THBS3	P49746	956 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	UBE2E1	P51965	193 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	ARHGDIB	P52566	201 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	LGALS4	P56470	323 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	RAB25	P57735	213 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	BPIFB3	P59826	476 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	DHODH	Q02127	395 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	CBX3	Q13185	183 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	HLA-DRB5	Q30154	266 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	PHLDA2	Q53GA4	152 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	MINOS1	Q5TGZ0	78 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	ZNF626	Q68DY1	528 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	C12orf54	Q6X4T0	127 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	ZNF818P	Q6ZRF7	136 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	VMO1	Q7Z5L0	202 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	LDLRAD3	Q86YD5	345 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	LYG1	Q8N1E2	194 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	PNKD	Q8N490	385 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	COQ8A	Q8NI60	647 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	ZNF431	Q8TF32	576 aa	Predicted RBP	7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	LEAP2	Q969E1	77 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	GALNT14	Q96FL9	552 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	PHB2	Q99623	299 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	PCGF1	Q9BSM1	259 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	PARP12	Q9H0J9	701 aa	Known RBP	7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	NAA60	Q9H7X0	242 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	HIF1AN	Q9NWT6	349 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	RNF150	Q9ULK6	438 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	AUP1	Q9Y679	476 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504	MINOS1-NBL1	R4GNA1	71 aa		7.75	□□□□□ -1.17
YBX3-215	ENST00000544504		A0A0B4J2A0	478 aa		7.74	□□□□□ -1.17
YBX3-215	ENST00000544504	C3orf85	A0A1B0GTC6	90 aa		7.74	□□□□□ -1.17
YBX3-215	ENST00000544504	C9orf170	A2RU37	121 aa		7.74	□□□□□ -1.17
YBX3-215	ENST00000544504	LEUTX	A8MZ59	168 aa		7.74	□□□□□ -1.17
YBX3-215	ENST00000544504		H0Y980	276 aa		7.74	□□□□□ -1.17
YBX3-215	ENST00000544504		M0R1X1	148 aa		7.74	□□□□□ -1.17
YBX3-215	ENST00000544504	ATG12	O94817	140 aa		7.74	□□□□□ -1.17

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