RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 FAM71F2Q6NXP2 309 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 RNF144BQ7Z419 303 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 OR10G4Q8NGN3 311 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 TMEM171Q8WVE6 324 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 DDIT4LQ96D03 193 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 DOCK7Q96N67 2140 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 LRFN3Q9BTN0 628 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 HHLA2Q9UM44 414 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 PTRH2Q9Y3E5 179 aaKnown RBP9.66□□□□□ -0.86
CDH4-201ENST00000543233 PXMP4Q9Y6I8 212 aa9.66□□□□□ -0.86
CDH4-201ENST00000543233 SPTBN2O15020 2390 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 DPRXA6NFQ7 191 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 TLX3O43711 291 aaPredicted RBP9.65□□□□□ -0.86
CDH4-201ENST00000543233 ZNF253O75346 499 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 ZFAND5O76080 213 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 ZNF133P52736 654 aaPredicted RBP9.65□□□□□ -0.86
CDH4-201ENST00000543233 PRSS12P56730 875 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 RAC3P60763 192 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 IL13RA2Q14627 380 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 VAX1Q5SQQ9 334 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 LCN12Q6JVE5 192 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 OR2Z1Q8NG97 314 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 RTN4IP1Q8WWV3 396 aaPredicted RBP9.65□□□□□ -0.86
CDH4-201ENST00000543233 SIGMAR1Q99720 223 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 NRN1Q9NPD7 142 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 RP1L1Q8IWN7 2480 aaPredicted RBP9.65□□□□□ -0.86
CDH4-201ENST00000543233 MYO7BQ6PIF6 2116 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 KIAA1324LA8MWY0 1029 aaPredicted RBP9.65□□□□□ -0.86
CDH4-201ENST00000543233 RAMP3O60896 148 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 VSIG8P0DPA2 414 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 ANOS1P23352 680 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 DUSP1P28562 367 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 SRP14P37108 136 aaKnown RBP9.65□□□□□ -0.86
CDH4-201ENST00000543233 PIGPP57054 158 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 PRDX4Q13162 271 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 PHYHD1Q5SRE7 291 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 STUMQ69YW2 141 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 OR4F5Q8NH21 305 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 OR4F4Q96R69 305 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 TMEM38BQ9NVV0 291 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 SS18L2Q9UHA2 77 aa9.65□□□□□ -0.86
CDH4-201ENST00000543233 TRAV8-6A0A0B4J262 113 aa9.65□□□□□ -0.87
CDH4-201ENST00000543233 RER1O15258 196 aa9.65□□□□□ -0.87
CDH4-201ENST00000543233 AADACP22760 399 aa9.65□□□□□ -0.87
CDH4-201ENST00000543233 SRSF7Q16629 238 aaKnown RBP eCLIP9.65□□□□□ -0.87
CDH4-201ENST00000543233 UEVLDQ8IX04 471 aa9.65□□□□□ -0.87
CDH4-201ENST00000543233 OR51E1Q8TCB6 317 aa9.65□□□□□ -0.87
CDH4-201ENST00000543233 ANAPC16Q96DE5 110 aa9.65□□□□□ -0.87
CDH4-201ENST00000543233 FNDC4Q9H6D8 234 aaPredicted RBP9.65□□□□□ -0.87
CDH4-201ENST00000543233 SMPXQ9UHP9 88 aa9.65□□□□□ -0.87
CDH4-201ENST00000543233 KIAA1549Q9HCM3 1950 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 LY6G6EA0A0G2JKS1 128 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 LIPT2A6NK58 231 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 ZNF737O75373 536 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 KBTBD11O94819 623 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 OR10J4P0C629 311 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 GUCA1AP43080 201 aaPredicted RBP9.64□□□□□ -0.87
CDH4-201ENST00000543233 DAP3P51398 398 aaKnown RBP9.64□□□□□ -0.87
CDH4-201ENST00000543233 ZNF154Q13106 437 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 SAP25Q8TEE9 199 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 BORCS7Q96B45 105 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 ZNF479Q96JC4 524 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 U3KQA8 63 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 NCOA6Q14686 2063 aaPredicted RBP9.64□□□□□ -0.87
CDH4-201ENST00000543233 SPAARA0A1B0GVQ0 90 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 H3BP45 60 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 MTCP1P56278 107 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 RPL15P61313 204 aaKnown RBP9.64□□□□□ -0.87
CDH4-201ENST00000543233 RPS18P62269 152 aaKnown RBP9.64□□□□□ -0.87
CDH4-201ENST00000543233 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 ST8SIA1Q92185 356 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 SPACA9Q96E40 222 aaPredicted RBP9.64□□□□□ -0.87
CDH4-201ENST00000543233 ARHGAP5-AS1Q96IT6 56 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 HINT2Q9BX68 163 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 TP53TG3Q9ULZ0 132 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 R4GMQ9 66 aa9.64□□□□□ -0.87
CDH4-201ENST00000543233 PITX3O75364 302 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 IFNA5P01569 189 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 CEACAM21Q3KPI0 293 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 ZNF788Q6ZQV5 615 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 SGMS2Q8NHU3 365 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 ADAT3Q96EY9 351 aaPredicted RBP9.63□□□□□ -0.87
CDH4-201ENST00000543233 KCNK17Q96T54 332 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 NAA38Q9BRA0 125 aaKnown RBP9.63□□□□□ -0.87
CDH4-201ENST00000543233 RPRMQ9NS64 109 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 DNAJC13O75165 2243 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 ADAMTS9Q9P2N4 1935 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 PPIAL4EA0A075B759 164 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 PPIAL4CA0A0B4J2A2 164 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 PPIAL4DF5H284 164 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 TRAPPC2LH3BP13 241 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 MSTNO14793 375 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 CNIH1O95406 144 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 TYMSP04818 313 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 PPIAL4FP0DN26 164 aa9.63□□□□□ -0.87
CDH4-201ENST00000543233 CEBPDP49716 269 aaPredicted RBP9.63□□□□□ -0.87
CDH4-201ENST00000543233 PLPPR5Q32ZL2 321 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms