RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 IGHG3P01860 377 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 RBP4P02753 201 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 PRB4P10163 310 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-208ENST00000542570 SLC25A4P12235 298 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 FHITP49789 147 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 ATP5J2P56134 94 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 LCN2P80188 198 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 DTD1Q8TEA8 209 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 MOB3AQ96BX8 217 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 GPR146Q96CH1 333 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 TVP23CQ96ET8 276 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 PATZ1Q9HBE1 687 aaKnown RBP8.55□□□□□ -1.04
TOP3A-208ENST00000542570 TMEM106BQ9NUM4 274 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 ETV2O00321 342 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-208ENST00000542570 MT-CO2P00403 227 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 HRASP01112 189 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 MMDQ15546 238 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 RTBDNQ9BSG5 229 aaPredicted RBP8.55□□□□□ -1.04
TOP3A-208ENST00000542570 RSG1Q9BU20 258 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 TPPP3Q9BW30 176 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 PIGMQ9H3S5 423 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 SLC25A15Q9Y619 301 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 S4R3C0 116 aa8.55□□□□□ -1.04
TOP3A-208ENST00000542570 BOD1L1Q8NFC6 3051 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 C17orf100A8MU93 164 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 SRSF10O75494 262 aaKnown RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 S100A9P06702 114 aaKnown RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 CCL1P22362 96 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 OTX1P32242 354 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 ABHD12Q8N2K0 398 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 ZDHHC16Q969W1 377 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 SLC35E1Q96K37 410 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 SNX22Q96L94 193 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 MS4A7Q9GZW8 240 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 ZNRD1Q9P1U0 126 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 SLC25A17O43808 307 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 TNFSF13O75888 250 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 CD74P04233 296 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 MGST1P10620 155 aaKnown RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 EGR1P18146 543 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 APOBEC3AP31941 199 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 SURF2Q15527 256 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 C20orf204Q6ZNR8 217 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 ZFP82Q8N141 532 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 OR4F5Q8NH21 305 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 OR4F4Q96R69 305 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 ZDHHC8Q9ULC8 765 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 RPS10-NUDT3A0A1W2PQS6 291 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 SFTPCP11686 197 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 ORM2P19652 201 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 RPS10P46783 165 aaKnown RBP8.54□□□□□ -1.04
TOP3A-208ENST00000542570 UQCC1Q9NVA1 299 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 MED9Q9NWA0 146 aa8.54□□□□□ -1.04
TOP3A-208ENST00000542570 C17orf98A8MV24 154 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 IQCF6A8MYZ5 107 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 IGHV1-46P01743 117 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 DAOP14920 347 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 TAS2R30P59541 319 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 EWSR1Q01844 656 aaKnown RBP eCLIP8.53□□□□□ -1.04
TOP3A-208ENST00000542570 ZNF787Q6DD87 383 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 TMEM222Q9H0R3 208 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 TLNRD1Q9H1K6 362 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 RHOFQ9HBH0 211 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 PPIAL4CA0A0B4J2A2 164 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 DVL1O14640 695 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 PGA5P0DJD9 388 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 PPIAL4GP0DN37 164 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 OR4S2Q8NH73 311 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 MRPL30Q8TCC3 161 aaKnown RBP8.53□□□□□ -1.04
TOP3A-208ENST00000542570 FLYWCH2Q96CP2 140 aaKnown RBP8.53□□□□□ -1.04
TOP3A-208ENST00000542570 ALX4Q9H161 411 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-208ENST00000542570 C17orf112F2Z3M2 114 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 K7N7A8 449 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 RPL35P42766 123 aaKnown RBP8.53□□□□□ -1.04
TOP3A-208ENST00000542570 UQCRFS1P47985 274 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 RHEBQ15382 184 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 VMA21Q3ZAQ7 101 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 FFAR4Q5NUL3 377 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 FAM166AQ6J272 317 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 ACSM6Q6P461 480 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 DUX4L9Q6RFH8 374 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-208ENST00000542570 PNKDQ8N490 385 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 OR10A7Q8NGE5 316 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 TM2D1Q9BX74 207 aa8.53□□□□□ -1.04
TOP3A-208ENST00000542570 MUC22E2RYF6 1773 aaPredicted RBP8.53□□□□□ -1.04
TOP3A-208ENST00000542570 CRYM-AS1A6NIL9 109 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 ZNF735P0CB33 412 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 TIMP3P35625 211 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 RAB7AP51149 207 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 NRN1LQ496H8 165 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 FAM90A1Q86YD7 464 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 VKORC1Q9BQB6 163 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 ATPIF1Q9UII2 106 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 ACANP16112 2415 aa8.52□□□□□ -1.04
TOP3A-208ENST00000542570 ZNF106Q9H2Y7 1883 aaKnown RBP8.52□□□□□ -1.05
TOP3A-208ENST00000542570 CA11O75493 328 aa8.52□□□□□ -1.05
TOP3A-208ENST00000542570 ADH4P08319 380 aa8.52□□□□□ -1.05
TOP3A-208ENST00000542570 NQO2P16083 231 aa8.52□□□□□ -1.05
TOP3A-208ENST00000542570 PRRX1P54821 245 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms