RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 C15orf65H3BRN8 121 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 F2RL2O00254 374 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 LHBP01229 141 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 KLF3P57682 345 aaPredicted RBP8.26□□□□□ -1.09
SS18-205ENST00000542420 RHEBQ15382 184 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 ETV3LQ6ZN32 361 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 TMEM182Q6ZP80 229 aaPredicted RBP8.26□□□□□ -1.09
SS18-205ENST00000542420 CENPVQ7Z7K6 275 aaPredicted RBP8.26□□□□□ -1.09
SS18-205ENST00000542420 ZNF295-AS1Q8N0V1 137 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 RBMXL3Q8N7X1 1067 aaKnown RBP8.26□□□□□ -1.09
SS18-205ENST00000542420 ZNF383Q8NA42 475 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.26□□□□□ -1.09
SS18-205ENST00000542420 NUP37Q8NFH4 326 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 LRRC29Q8WV35 223 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 C14orf79Q96F83 325 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 CLCC1Q96S66 551 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 DIRC2Q96SL1 478 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 SH3BGRL3Q9H299 93 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 PSENENQ9NZ42 101 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 PPP1R3CQ9UQK1 317 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 FAM96BQ9Y3D0 163 aa8.26□□□□□ -1.09
SS18-205ENST00000542420 MKRN2OSH3BPM6 223 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 AP4M1O00189 453 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 PRDX2P32119 198 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 SELENOVP59797 346 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 PRAMEF6Q5VXH4 476 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 ZNF474Q6S9Z5 364 aaPredicted RBP8.25□□□□□ -1.09
SS18-205ENST00000542420 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 C5orf24Q7Z6I8 188 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 MRGPRGQ86SM5 289 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 FGFRL1Q8N441 504 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 GCSAMQ8N6F7 178 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 OR1L1Q8NH94 360 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 Q8TCH9 128 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 MISP3Q96FF7 219 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 MAGT1Q9H0U3 335 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 FAM234AQ9H0X4 552 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 TMEM231Q9H6L2 316 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.25□□□□□ -1.09
SS18-205ENST00000542420 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 HSPB1P04792 205 aaKnown RBP8.25□□□□□ -1.09
SS18-205ENST00000542420 TAGLN2P37802 199 aaKnown RBP8.25□□□□□ -1.09
SS18-205ENST00000542420 GABRA2P47869 451 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 FABP6P51161 128 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 CLINT1Q14677 625 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 LRRC75BQ2VPJ9 315 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 ZNF506Q5JVG8 444 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 CYB5R2Q6BCY4 276 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 ZNF525Q8N782 197 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 FAM213BQ8TBF2 198 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 SCGB1C1Q8TD33 95 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 MBD3L1Q8WWY6 194 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 OR2D2Q9H210 308 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 OR6C3Q9NZP0 311 aa8.25□□□□□ -1.09
SS18-205ENST00000542420 CXorf65A6NEN9 183 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 WISP2O76076 250 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 MT-ND4LP03901 98 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 HIST1H1BP16401 226 aaKnown RBP8.24□□□□□ -1.09
SS18-205ENST00000542420 RAB7AP51149 207 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 RAB4BP61018 213 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 UBE2KP61086 200 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 TNFRSF9Q07011 255 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 AESQ08117 197 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 PDLIM3Q53GG5 364 aaPredicted RBP8.24□□□□□ -1.09
SS18-205ENST00000542420 KHDC3LQ587J8 217 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 KIAA2026Q5HYC2 2103 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 SPSB3Q6PJ21 355 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 FAM180AQ6UWF9 173 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 Q6ZRM9 215 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 ZNF826PQ6ZT77 177 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 CD177Q8N6Q3 437 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 CA5BP1Q8WTZ4 195 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 SSX3Q99909 188 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 KCNJ16Q9NPI9 418 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 IL19Q9UHD0 177 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 TP53TG5Q9Y2B4 290 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 LRRC30A6NM36 301 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 WNT9BO14905 357 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 TCAPO15273 167 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 EPHA1P21709 976 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 PCP4P48539 62 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 LBHQ53QV2 105 aaPredicted RBP8.24□□□□□ -1.09
SS18-205ENST00000542420 NCMAPQ5T1S8 102 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 CLEC9AQ6UXN8 241 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 OR52E5Q8NH55 327 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 S100PBPQ96BU1 408 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 MALSU1Q96EH3 234 aa8.24□□□□□ -1.09
SS18-205ENST00000542420 EIF5A2Q9GZV4 153 aaKnown RBP8.24□□□□□ -1.09
SS18-205ENST00000542420 FAM186AA6NE01 2351 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 ODAMA1E959 279 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 RBFOX3A6NFN3 312 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 A8MXE2 369 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 CST7O76096 145 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 CLDN1O95832 211 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 MBP02144 154 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 CD55P08174 381 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 TNFSF4P23510 183 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 MAS1LP35410 378 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 TGIF2LXQ8IUE1 241 aa8.23□□□□□ -1.09
SS18-205ENST00000542420 OR2Z1Q8NG97 314 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms