RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 SSX8Q7RTT4 187 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 SPAG16Q8N0X2 631 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 PHYHIPLQ96FC7 376 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 SPIN2AQ99865 258 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 SPIN2BQ9BPZ2 258 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 PLEKHA2Q9HB19 425 aa14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 UTP20O75691 2785 aaKnown RBP14.26□□□□□ -0.13
TMEM50B-210ENST00000542230 DUXBA0A1W2PPF3 345 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 LRRC30A6NM36 301 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 F2RL2O00254 374 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 CLDN1O95832 211 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 FAM157CP0CG43 387 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 NFYBP25208 207 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 LOXP28300 417 aaPredicted RBP14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 P2RY1P47900 373 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 FAM209AQ5JX71 171 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 OR2C3Q8N628 320 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 DIRC2Q96SL1 478 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 EGLN1Q9GZT9 426 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 KCNJ16Q9NPI9 418 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 C19orf12Q9NSK7 152 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 GPR137BO60478 399 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 CST7O76096 145 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 EWSR1Q01844 656 aaKnown RBP eCLIP14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 ZNF273Q14593 569 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 CLINT1Q14677 625 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 IFI27L2Q9H2X8 130 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 OR6C3Q9NZP0 311 aa14.25□□□□□ -0.13
TMEM50B-210ENST00000542230 KBTBD11-OT1A0A1B0GTJ5 212 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 LY6HO94772 140 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 CT45A1Q5HYN5 189 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 TRAT1Q6PIZ9 186 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 CT45A3Q8NHU0 189 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 CLN8Q9UBY8 286 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 PPIAL4EA0A075B759 164 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 A0A1B0GU03 582 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 PPIAL4DF5H284 164 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 WRBO00258 174 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 PPIAL4FP0DN26 164 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 IAPPP10997 89 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 GPR12P47775 334 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 SWI5Q1ZZU3 235 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 PRAMEF5Q5TYX0 476 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 MALRD1Q5VYJ5 2156 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 MUC15Q8N387 334 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 TMEM217Q8N7C4 229 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 OR1S2Q8NGQ3 325 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 CTSZQ9UBR2 303 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 JPT1Q9UK76 154 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 PPIAL4AQ9Y536 164 aa14.24□□□□□ -0.13
TMEM50B-210ENST00000542230 MYO18BQ8IUG5 2567 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 USP9XQ93008 2570 aaPredicted RBP14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 HCFC1P51610 2035 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 VSTM5A8MXK1 200 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 YPEL1O60688 119 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 ZG16O60844 167 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 TMEM252Q8N6L7 170 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 YPEL2Q96QA6 119 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 SH3BGRL3Q9H299 93 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 SLC25A10Q9UBX3 287 aaPredicted RBP14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 MAP1AP78559 2803 aaPredicted RBP14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 TRGV10A0A0A0MS01 117 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 CCL3L1P16619 93 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 COL8A2P25067 703 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 DUTP33316 252 aaKnown RBP14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 GNG10P50151 68 aa14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 LSM10Q969L4 123 aaKnown RBP14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 LYRM2Q9NU23 88 aaPredicted RBP14.23□□□□□ -0.13
TMEM50B-210ENST00000542230 MED13LQ71F56 2210 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 EPG5Q9HCE0 2579 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 TRAV38-1A0A0B4J264 116 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 B9A039 149 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 TAAR5O14804 337 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 EFNB3Q15768 340 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 ZNF672Q499Z4 452 aaPredicted RBP14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 GPR157Q5UAW9 335 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 ZBTB34Q8NCN2 500 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 LINC00052Q96N35 136 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 MS4A5Q9H3V2 200 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 GFOD1Q9NXC2 390 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 M0R1X1 148 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 TNFRSF13BO14836 293 aaPredicted RBP14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 FGF16O43320 207 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 GNLYP22749 145 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 VKORC1L1Q8N0U8 176 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 ZFP57Q9NU63 452 aa14.22□□□□□ -0.13
TMEM50B-210ENST00000542230 IGHV1-69-2A0A0G2JMI3 117 aa14.21□□□□□ -0.13
TMEM50B-210ENST00000542230 RNF212BA8MTL3 300 aa14.21□□□□□ -0.13
TMEM50B-210ENST00000542230 VAMP2P63027 116 aa14.21□□□□□ -0.13
TMEM50B-210ENST00000542230 TMEM267Q0VDI3 215 aaPredicted RBP14.21□□□□□ -0.13
TMEM50B-210ENST00000542230 HSD17B11Q8NBQ5 300 aa14.21□□□□□ -0.13
TMEM50B-210ENST00000542230 EDARADDQ8WWZ3 215 aa14.21□□□□□ -0.13
TMEM50B-210ENST00000542230 PFDN2Q9UHV9 154 aa14.21□□□□□ -0.13
TMEM50B-210ENST00000542230 FCGR3BO75015 233 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 SCO1O75880 301 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 P0C879 139 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 SPINK9Q5DT21 86 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 ABHD14AQ9BUJ0 271 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 CSMD1Q96PZ7 3565 aa14.2□□□□□ -0.14
TMEM50B-210ENST00000542230 A0A1W2PPR1 153 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms