RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 LOC390937A0A1W2PQ73 354 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 CTHRC1Q96CG8 243 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 RCC1LQ96I51 464 aaKnown RBP12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 GUCD1Q96NT3 240 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 TRAV39A0A0B4J263 110 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 C2CD4DB7Z1M9 353 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 PSG4Q00888 419 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 COL10A1Q03692 680 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 WDR54Q9H977 334 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 DNAJC4Q9NNZ3 241 aa12.91□□□□□ -0.34
SMARCA4-207ENST00000541122 CA7P43166 264 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 ZNF124Q15973 351 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 TMEM136Q6ZRR5 245 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 BIVMQ86UB2 503 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 IGHV3-13P01766 116 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 IGHV3-7P01780 117 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 ARL14EPLP0DKL9 152 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 SMIM10L1P0DMW3 83 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 EPHA8P29322 1005 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 PSMG4Q5JS54 123 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 ASCL5Q7RTU5 278 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 APOBEC4Q8WW27 367 aaKnown RBP12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 SMIM10Q96HG1 83 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 SCNM1Q9BWG6 230 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 AUP1Q9Y679 476 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 GRIFINA4D1Z8 144 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 ATP5IP56385 69 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 MIC13Q5XKP0 118 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 PRNTQ86SH4 94 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 GCSAMQ8N6F7 178 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 FAM216AQ8WUB2 273 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 SDF2L1Q9HCN8 221 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 RPRMQ9NS64 109 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 TMEM140Q9NV12 185 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 K7EQS6 105 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 MGST3O14880 152 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 LINC01565O15544 149 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 GOSR1O95249 250 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 C8orf88P0DMB2 117 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 HOXA4Q00056 320 aaPredicted RBP12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 ABHD3Q8WU67 409 aa12.9□□□□□ -0.34
SMARCA4-207ENST00000541122 LIPFP07098 398 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 LINC00869P0C866 280 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 CCL3P10147 92 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 UBALD2Q8IYN6 164 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 MRPL32Q9BYC8 188 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 DLL1O00548 723 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF735P0CB33 412 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 RPS20P60866 119 aaKnown RBP12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 IER2Q9BTL4 223 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 TM2D1Q9BX74 207 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 IL11P20809 199 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 MPZP25189 248 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 IL36BQ9NZH7 164 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 OR4A8P0C604 315 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 GCSHP23434 173 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 CLDND2Q8NHS1 167 aa12.89□□□□□ -0.35
SMARCA4-207ENST00000541122 COX6CP09669 75 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 FGF5P12034 268 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 CD40P25942 277 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 TWIST1Q15672 202 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 OR2J1Q9GZK6 312 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 OPN3Q9H1Y3 402 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF430Q9H8G1 570 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF646O15015 1829 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 S1PR2O95136 353 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 NIT1Q86X76 327 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 TMEM170AQ8WVE7 144 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 RAB37Q96AX2 223 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 HEXA-AS1Q9H8Q6 139 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 M0R3E3 92 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 LRRC75BQ2VPJ9 315 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 UNC119Q13432 240 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF658BQ4V348 819 aaPredicted RBP12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 ZNF818PQ6ZRF7 136 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 MOGAT3Q86VF5 341 aa12.88□□□□□ -0.35
SMARCA4-207ENST00000541122 OR2H2O95918 312 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 FBXW9Q5XUX1 488 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 BHLHA15Q7RTS1 189 aaPredicted RBP12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 FAM222BQ8WU58 562 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 DEFB109BQ30KR1 87 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 LOC389332A0A1B0GUA5 103 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 MKRN2OSH3BPM6 223 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 SPINT1O43278 529 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 THY1P04216 161 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 CKS2P33552 79 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 LGALS7P47929 136 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 NPBWR2P48146 333 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 LY6G6FQ5SQ64 297 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 DGAT2L7PQ6IED9 249 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 C1QL4Q86Z23 238 aa12.87□□□□□ -0.35
SMARCA4-207ENST00000541122 CALHM1Q8IU99 346 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms