RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	IGKV1D-13	A0A0B4J2D9	117 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A1W2PPQ1	181 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A6NNC1	897 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PRB1	P04280	392 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SCT	P09683	121 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IGKV1-13	P0DP09	117 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NPBWR2	P48146	333 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	KLF3	P57682	345 aa	Predicted RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	B3GALT5-AS1	P59052	145 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TNFRSF9	Q07011	255 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ENDOG	Q14249	297 aa	Known RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM183A	Q8IXX5	376 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CCDC71L	Q8N9Z2	235 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		Q8NA96	180 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR51H1	Q8NH63	302 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PP6455	Q8WZ26	134 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TMEM222	Q9H0R3	208 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PLK3	Q9H4B4	646 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SDF2L1	Q9HCN8	221 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CCL28	Q9NRJ3	127 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FUT9	Q9Y231	359 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		V9GYS6	101 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A0G2JRQ6	117 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C5orf49	A4QMS7	147 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SMPD2	O60906	423 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SCGB1D1	O95968	90 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CYB5R3	P00387	301 aa	Predicted RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	METTL15P1	P0C7V9	234 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	BCL2	P10415	239 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF16	P17020	682 aa	Predicted RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GNB2	P62879	340 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	H3F3A	P84243	136 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF726P1	Q15940	193 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	KIAA2026	Q5HYC2	2103 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FAM27B	Q5VT28	67 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF774	Q6NX45	483 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TEX38	Q6PEX7	206 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GGN	Q86UU5	652 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OR5R1	Q8NH85	324 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NEK7	Q8TDX7	302 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PIGC	Q92535	297 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RBMXL1	Q96E39	390 aa	Known RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RBM14	Q96PK6	669 aa	Known RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C11orf1	Q9H5F2	150 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A0G2JNJ9	132 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF732	B4DXR9	585 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IFNA5	P01569	189 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TDGF1P3	P51864	188 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TAS2R30	P59541	319 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RPS16	P62249	146 aa	Known RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SP5	Q6BEB4	398 aa	Predicted RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CALHM1	Q8IU99	346 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	FAM185A	Q8N0U4	392 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	OSR2	Q8N2R0	312 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HS3ST6	Q96QI5	342 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SMIM7	Q9BQ49	75 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RTL8A	Q9BWD3	113 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RBKS	Q9H477	322 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PROK2	Q9HC23	129 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		Q9UFV3	132 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	COL6A6	A6NMZ7	2263 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DVL1	O14640	695 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CDS2	O95674	445 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	HBE1	P02100	147 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF32	P17041	273 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DTYMK	P23919	212 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	WNT5A	P41221	380 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RPL29	P47914	159 aa	Known RBP	4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PAX9	P55771	341 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PAX5	Q02548	391 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NCR3LG1	Q68D85	454 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	VWA1	Q6PCB0	445 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	UBALD1	Q8TB05	177 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	GATAD1	Q8WUU5	269 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RAB1C	Q92928	201 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PLPPR2	Q96GM1	343 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TECTB	Q96PL2	329 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ATP5S	Q99766	215 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		Q9N2K0	584 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PRSS50	Q9UI38	385 aa		4.8	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	NKX6-3	A6NJ46	265 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CA11	O75493	328 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RND2	P52198	227 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ARL16	Q0P5N6	197 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	C10orf128	Q5T292	105 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	CLEC2A	Q6UVW9	174 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	BTNL3	Q6UXE8	466 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SLC25A26	Q70HW3	274 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PLPPR1	Q8TBJ4	325 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	SCGB1C1	Q8TD33	95 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	RCC1L	Q96I51	464 aa	Known RBP	4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	ADGRG7	Q96K78	797 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	IL36RN	Q9UBH0	155 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	TRAV39	A0A0B4J263	110 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		A0A0U1RQV5	110 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783		B9A039	149 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	PPP5D1	E7EU14	171 aa		4.79	□□□□□ -1.64
RAPGEF4-215	ENST00000540783	DFFB	O76075	338 aa		4.79	□□□□□ -1.64

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