RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 UBAC2Q8NBM4 344 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 C11orf1Q9H5F2 150 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 LYRM2Q9NU23 88 aaPredicted RBP14.2□□□□□ -0.14
LTBR-207ENST00000539925 DCAF16Q9NXF7 216 aa14.2□□□□□ -0.14
LTBR-207ENST00000539925 RPUSD1Q9UJJ7 312 aaKnown RBP14.2□□□□□ -0.14
LTBR-207ENST00000539925 ATRXP46100 2492 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 TRBV23-1A0A0A0MS06 115 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 FAM90A9PA6NNJ1 464 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 GOSR1O95249 250 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 DAOP14920 347 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 CDSNQ15517 529 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 LTC4SQ16873 150 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 RNF141Q8WVD5 230 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 NEU4Q8WWR8 484 aaPredicted RBP14.19□□□□□ -0.14
LTBR-207ENST00000539925 CACNG5Q9UF02 275 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 FBXL17Q9UF56 701 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 DSCAMO60469 2012 aa14.19□□□□□ -0.14
LTBR-207ENST00000539925 IGKV1-5P01602 117 aa14.18□□□□□ -0.14
LTBR-207ENST00000539925 DUTP33316 252 aaKnown RBP14.18□□□□□ -0.14
LTBR-207ENST00000539925 POLR2GP62487 172 aaKnown RBP eCLIP14.18□□□□□ -0.14
LTBR-207ENST00000539925 ZNF266Q14584 549 aa14.18□□□□□ -0.14
LTBR-207ENST00000539925 CXorf66Q5JRM2 361 aaPredicted RBP14.18□□□□□ -0.14
LTBR-207ENST00000539925 COMMD7Q86VX2 200 aa14.18□□□□□ -0.14
LTBR-207ENST00000539925 TGIF2LYQ8IUE0 185 aa14.18□□□□□ -0.14
LTBR-207ENST00000539925 ITLN2Q8WWU7 325 aaPredicted RBP14.18□□□□□ -0.14
LTBR-207ENST00000539925 ZNF714Q96N38 554 aa14.18□□□□□ -0.14
LTBR-207ENST00000539925 IFI27L2Q9H2X8 130 aa14.18□□□□□ -0.14
LTBR-207ENST00000539925 WSB1Q9Y6I7 421 aa14.18□□□□□ -0.14
LTBR-207ENST00000539925 LEUTXA8MZ59 168 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 KCNAB3O43448 404 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 HPRT1P00492 218 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 EPHA1P21709 976 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 THBS3P49746 956 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 RPL30P62888 115 aaKnown RBP14.17□□□□□ -0.14
LTBR-207ENST00000539925 HEPN1Q6WQI6 88 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 MARVELD3Q96A59 401 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 C5orf30Q96GV9 206 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 SESN1Q9Y6P5 492 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 ROS1P08922 2347 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 DIDO1Q9BTC0 2240 aaKnown RBP14.17□□□□□ -0.14
LTBR-207ENST00000539925 TANC2Q9HCD6 1990 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 ANKRD34BA5PLL1 514 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 M0R1X1 148 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 SSSCA1O60232 199 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 SCAF4O95104 1147 aaKnown RBP14.17□□□□□ -0.14
LTBR-207ENST00000539925 GNLYP22749 145 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 CAV2P51636 162 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 EWSR1Q01844 656 aaKnown RBP eCLIP14.17□□□□□ -0.14
LTBR-207ENST00000539925 DUX4L9Q6RFH8 374 aaPredicted RBP14.17□□□□□ -0.14
LTBR-207ENST00000539925 TCF23Q7RTU1 214 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 C8orf31Q8N9H6 132 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 S1PR3Q99500 378 aa14.17□□□□□ -0.14
LTBR-207ENST00000539925 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.17□□□□□ -0.14
LTBR-207ENST00000539925 TPRP12270 2363 aaKnown RBP14.16□□□□□ -0.14
LTBR-207ENST00000539925 ARFGEF3Q5TH69 2177 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 A0A0G2JRQ6 117 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 A0A1W2PPH5 198 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 SYNGR2O43760 224 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 CHST1O43916 411 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 ZG16O60844 167 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 P0C879 139 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 H2BFWTQ7Z2G1 175 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 DTX2Q86UW9 622 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 STX12Q86Y82 276 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 TMEM252Q8N6L7 170 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 ZNF439Q8NDP4 499 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 TIMD4Q96H15 378 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 CITED4Q96RK1 184 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 ARV1Q9H2C2 271 aa14.16□□□□□ -0.14
LTBR-207ENST00000539925 ARID1AO14497 2285 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 C17orf98A8MV24 154 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 NUDT19A8MXV4 375 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 OMGP23515 440 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 NFYBP25208 207 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 ERVK-16P61578 105 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 TAGLNQ01995 201 aaKnown RBP14.15□□□□□ -0.14
LTBR-207ENST00000539925 CT45A1Q5HYN5 189 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 RPL7L1Q6DKI1 246 aaKnown RBP14.15□□□□□ -0.14
LTBR-207ENST00000539925 BTNL3Q6UXE8 466 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 SLC25A48Q6ZT89 311 aaKnown RBP14.15□□□□□ -0.14
LTBR-207ENST00000539925 OR4S2Q8NH73 311 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 CT45A3Q8NHU0 189 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 SAT2Q96F10 170 aaPredicted RBP14.15□□□□□ -0.14
LTBR-207ENST00000539925 SMIM8Q96KF7 97 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 CIB3Q96Q77 187 aaPredicted RBP14.15□□□□□ -0.14
LTBR-207ENST00000539925 AIFM2Q9BRQ8 373 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 COL6A6A6NMZ7 2263 aa14.15□□□□□ -0.14
LTBR-207ENST00000539925 KIAA1324LA8MWY0 1029 aaPredicted RBP14.14□□□□□ -0.15
LTBR-207ENST00000539925 DVL1O14640 695 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 FGF16O43320 207 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 DFFBO76075 338 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 S1PR2O95136 353 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 SEC11BP0C7V7 166 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 ZNF816Q0VGE8 651 aaPredicted RBP14.14□□□□□ -0.15
LTBR-207ENST00000539925 MIDNQ504T8 468 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 TMEM200BQ69YZ2 307 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 C11orf71Q6IPW1 123 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 EIF4E3Q8N5X7 224 aaKnown RBP14.14□□□□□ -0.15
LTBR-207ENST00000539925 MAGT1Q9H0U3 335 aa14.14□□□□□ -0.15
LTBR-207ENST00000539925 C19orf12Q9NSK7 152 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms