RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 GFOD1Q9NXC2 390 aa10.05□□□□□ -0.8
CLSTN3-208ENST00000538933 SCP2D1Q9UJQ7 156 aa10.05□□□□□ -0.8
CLSTN3-208ENST00000538933 KPTNQ9Y664 436 aa10.05□□□□□ -0.8
CLSTN3-208ENST00000538933 SESN1Q9Y6P5 492 aa10.05□□□□□ -0.8
CLSTN3-208ENST00000538933 TRBV6-7A0A0A0MS04 114 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 C17orf98A8MV24 154 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 NPIPB11E5RHQ5 1161 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 F2RL2O00254 374 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 TOR1AO14656 332 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 LYRM1O43325 122 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 RBP4P02753 201 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 CD74P04233 296 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 NFYAP23511 347 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 FCGR2CP31995 323 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 FXYD4P59646 89 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 HTD2P86397 168 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 CD69Q07108 199 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 ARRDC1Q8N5I2 433 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 OR2AK2Q8NG84 335 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 OR52M1Q8NGK5 317 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 OR13D1Q8NGV5 346 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 OR56B4Q8NH76 319 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 EDARADDQ8WWZ3 215 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 PRRT1Q99946 306 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 ZNF2Q9BSG1 426 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 METTL8Q9H825 291 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 HEXA-AS1Q9H8Q6 139 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 HRASLSQ9HDD0 168 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 SIRT7Q9NRC8 400 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 OR1A1Q9P1Q5 309 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 FAM96BQ9Y3D0 163 aa10.04□□□□□ -0.8
CLSTN3-208ENST00000538933 IGHV3-7P01780 117 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 FBP1P09467 338 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 CGB3P0DN86 165 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 CGB7P0DN87 165 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 COX7A1P24310 79 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 PPP1CCP36873 323 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 GNG10P50151 68 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 DLX6P56179 175 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 NCR3LG1Q68D85 454 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 OVCH2Q7RTZ1 564 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 VMO1Q7Z5L0 202 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 OR4D10Q8NGI6 311 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 OR51S1Q8NGJ8 323 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 OR5R1Q8NH85 324 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 ENKURQ8TC29 256 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 R3HDM4Q96D70 268 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 TMEM133Q9H2Q1 129 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 RDH8Q9NYR8 311 aa10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 HUWE1Q7Z6Z7 4374 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-208ENST00000538933 IGKV1-6A0A0C4DH72 117 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 FAM240BA0A1B0GVZ2 78 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 BTBD17A6NE02 478 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 C3orf84H3BNL1 204 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 YPEL1O60688 119 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 MMP23AO75900 390 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 CD28P10747 220 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 PGAM2P15259 253 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 ASAH1Q13510 395 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 GNMTQ14749 295 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 MORN2Q502X0 79 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 H1FOOQ8IZA3 346 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 OR4F17Q8NGA8 305 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 LEAP2Q969E1 77 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 TOMM40LQ969M1 308 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 YPEL2Q96QA6 119 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 OR4F4Q96R69 305 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 LINC00574Q9H8X3 128 aa10.02□□□□□ -0.81
CLSTN3-208ENST00000538933 PPYP01298 95 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 VSIG10L2P0DP72 767 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 AADACP22760 399 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 IL3RAP26951 378 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 ECI1P42126 302 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 RAB7AP51149 207 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 PRRX1P54821 245 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 IDO2Q6ZQW0 420 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 NDUFA11Q86Y39 141 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 ABHD12Q8N2K0 398 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 PNKDQ8N490 385 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 OR10X1Q8NGY0 326 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 OR9G1Q8NH87 305 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 ZNF596Q8TC21 504 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 SECTM1Q8WVN6 248 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 GIMAP1Q8WWP7 306 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 SCGB3A2Q96PL1 93 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 ABHD14AQ9BUJ0 271 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 CLEC7AQ9BXN2 247 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 C11orf54Q9H0W9 315 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 ZNF221Q9UK13 617 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 TBC1D24Q9ULP9 559 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 PSG11Q9UQ72 335 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 OR2W1Q9Y3N9 320 aa10.01□□□□□ -0.81
CLSTN3-208ENST00000538933 IGHV2-26A0A0B4J1V2 119 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 A0A1W2PPE3 182 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 ST8SIA5O15466 376 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 PLA2G10O15496 165 aa10□□□□□ -0.81
CLSTN3-208ENST00000538933 FBXO24O75426 580 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms