RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, human

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD4-205	ENST00000536301	SOX2	P48431	317 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	EXOSC2	Q13868	293 aa	Known RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	MRGPRG-AS1	Q2M3A8	158 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	MOGAT2	Q3SYC2	334 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	TM4SF20	Q53R12	229 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	NHLRC3	Q5JS37	347 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	DMKN	Q6E0U4	476 aa	Predicted RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	ZNF529	Q6P280	563 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	ZFP1	Q6P2D0	407 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	FDX2	Q6P4F2	183 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	C19orf35	Q6ZS72	473 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	FAM220A	Q7Z4H9	259 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	DHFR2	Q86XF0	187 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	GAPT	Q8N292	157 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	PARP16	Q8N5Y8	322 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	GVQW1	Q8N7I0	195 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	OR52N1	Q8NH53	320 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	KCNG3	Q8TAE7	436 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	MRPL30	Q8TCC3	161 aa	Known RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	BORCS5	Q969J3	196 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	RNF183	Q96D59	192 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	PELI1	Q96FA3	418 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	ABHD14B	Q96IU4	210 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	GPER1	Q99527	375 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	PDCD1LG2	Q9BQ51	273 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	S100A14	Q9HCY8	104 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	H2AFY2	Q9P0M6	372 aa	Predicted RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	WARS2	Q9UGM6	360 aa	Known RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	RSL24D1	Q9UHA3	163 aa	Known RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	ZNF230	Q9UIE0	474 aa	Predicted RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	RNF150	Q9ULK6	438 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	TP53TG1	Q9Y2A0	90 aa		3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	FLG2	Q5D862	2391 aa	Predicted RBP	3.85	□□□□□ -1.79
CHD4-205	ENST00000536301	NACA	E9PAV3	2078 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		A0A0G2JLM5	398 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	UBE2QL1	A1L167	161 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	TMEM213	A2RRL7	107 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	FAM90A23P	A8MXZ1	464 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	IGLL5	B9A064	214 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		H3BUA1	57 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		H7C2Y5	167 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		J3QLW9	94 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		J3QRE1	110 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	MAGEB3	O15480	346 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	YPEL1	O60688	119 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	NOL3	O60936	208 aa	Known RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	OR2C1	O95371	312 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	IGLV2-23	P01705	113 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	IGHV3-23	P01764	117 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	MAS1	P04201	325 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	CRYGB	P07316	175 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	ZNF19	P17023	458 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	RPL35A	P18077	110 aa	Known RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	ATF4	P18848	351 aa	Predicted RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	CD40LG	P29965	261 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	ZNF124	Q15973	351 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	TATDN3	Q17R31	274 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	MPV17L	Q2QL34	196 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	SLC22A6	Q4U2R8	563 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	C6orf183	Q5T699	404 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	STEAP3	Q658P3	488 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	THOC7	Q6I9Y2	204 aa	Known RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	SIGIRR	Q6IA17	410 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		Q6ZNX1	250 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		Q6ZWC4	215 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	GID4	Q8IVV7	300 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	MAPKAPK5-AS1	Q8N8E1	139 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	ZNF383	Q8NA42	475 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	ADAD2	Q8NCV1	583 aa	Known RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	OR52B4	Q8NGK2	314 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	FBLIM1	Q8WUP2	373 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	FAM46B	Q96A09	425 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	CCDC124	Q96CT7	223 aa	Known RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	C4orf36	Q96KX1	117 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	YPEL2	Q96QA6	119 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	THTPA	Q9BU02	230 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	TEX12	Q9BXU0	123 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	ISG20L2	Q9H9L3	353 aa	Known RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	AKIP1	Q9NQ31	210 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	MBNL3	Q9NUK0	354 aa	Known RBP	3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	COA4	Q9NYJ1	87 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	PEMT	Q9UBM1	199 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	AASS	Q9UDR5	926 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	JPT1	Q9UK76	154 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	WASHC3	Q9Y3C0	194 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	AP4S1	Q9Y587	144 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301		S4R3C0	116 aa		3.84	□□□□□ -1.79
CHD4-205	ENST00000536301	hCG_2014768	A0A024R1R8	64 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	SLC22A1	O15245	554 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	SLC16A6	O15403	523 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	AIRE	O43918	545 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	RAB3A	P20336	220 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	AADAC	P22760	399 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	CBLN1	P23435	193 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	CCR9	P51686	369 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	RPS16	P62249	146 aa	Known RBP	3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	RHOG	P84095	191 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	RBMS2	Q15434	407 aa	Known RBP	3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	C6orf141	Q5SZD1	244 aa		3.83	□□□□□ -1.8
CHD4-205	ENST00000536301	OGFRL1	Q5TC84	451 aa	Predicted RBP	3.83	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms