RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 AQP7O14520 342 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 CLDN1O95832 211 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 COX5AP20674 150 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 G6PCP35575 357 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 DLK1P80370 383 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 LRRC75BQ2VPJ9 315 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 ZNF787Q6DD87 383 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 ZBTB34Q8NCN2 500 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 COQ2Q96H96 371 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 LURAP1Q96LR2 239 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 PSMG3Q9BT73 122 aaPredicted RBP11.04□□□□□ -0.64
LDLR-203ENST00000535915 CACNA1HO95180 2353 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 LOC102723971A0A1B0GUV8 181 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 C1QTNF9BB2RNN3 333 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 FAM90A26D6RGX4 464 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 YIF1AO95070 293 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 CECR9P0C854 216 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 RPL30P62888 115 aaKnown RBP11.04□□□□□ -0.64
LDLR-203ENST00000535915 TNFRSF9Q07011 255 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 FOXF2Q12947 444 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 OR8G2PQ6IF36 304 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 WDR82Q6UXN9 313 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 Q6ZR03 302 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 TPRX1Q8N7U7 411 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 DEFB124Q8NES8 71 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 TVP23CQ96ET8 276 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 OR4C12Q96R67 309 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 RBKSQ9H477 322 aa11.04□□□□□ -0.64
LDLR-203ENST00000535915 DMXL1Q9Y485 3027 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 ATXN7O15265 892 aaPredicted RBP11.03□□□□□ -0.64
LDLR-203ENST00000535915 PTBP3O95758 552 aaKnown RBP11.03□□□□□ -0.64
LDLR-203ENST00000535915 FGF8P55075 233 aaPredicted RBP11.03□□□□□ -0.64
LDLR-203ENST00000535915 SLC38A11Q08AI6 406 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 CATR1Q13166 79 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 BTNL3Q6UXE8 466 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 C1orf162Q8NEQ5 155 aaPredicted RBP11.03□□□□□ -0.64
LDLR-203ENST00000535915 SARAFQ96BY9 339 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 C5orf30Q96GV9 206 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 WDR61Q9GZS3 305 aaKnown RBP11.03□□□□□ -0.64
LDLR-203ENST00000535915 TRAV17A0A0B4J275 112 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 IFNA17P01571 189 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 GCH1P30793 250 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 SERF2P84101 59 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 MSMO1Q15800 293 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 MUCL1Q96DR8 90 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 MALSU1Q96EH3 234 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 ZNF665Q9H7R5 613 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 PTPRBP23467 1997 aa11.03□□□□□ -0.64
LDLR-203ENST00000535915 SPAARA0A1B0GVQ0 90 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 PRR33A8MZF0 331 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 S1PR2O95136 353 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 WT1P19544 449 aaPredicted RBP11.02□□□□□ -0.64
LDLR-203ENST00000535915 GLIPR1P48060 266 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 ELLP55199 621 aaPredicted RBP11.02□□□□□ -0.64
LDLR-203ENST00000535915 RAB11AP62491 216 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 COL10A1Q03692 680 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 ZNF718Q3SXZ3 478 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 SSX7Q7RTT5 188 aa11.02□□□□□ -0.64
LDLR-203ENST00000535915 EP300Q09472 2414 aaPredicted RBP11.02□□□□□ -0.65
LDLR-203ENST00000535915 HCFC1P51610 2035 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 IGHV3-43A0A0B4J1X8 118 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 CXorf65A6NEN9 183 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 FTH1P19P0C7X4 201 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 IGHV3-43DP0DP04 118 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 KITLGP21583 273 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 SSTR5P35346 364 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 MAS1LP35410 378 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 HNF4GQ14541 408 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 SMIM21Q3B7S5 101 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 HEPN1Q6WQI6 88 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 PRR7Q8TB68 274 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 TAF15Q92804 592 aaKnown RBP eCLIP11.02□□□□□ -0.65
LDLR-203ENST00000535915 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
LDLR-203ENST00000535915 YPEL4Q96NS1 127 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 HSPB7Q9UBY9 170 aa11.02□□□□□ -0.65
LDLR-203ENST00000535915 A0A087WWC5 75 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 ODAMA1E959 279 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 OR5H1A6NKK0 313 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 C17orf98A8MV24 154 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 BCL2P10415 239 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 RPS10P46783 165 aaKnown RBP11.01□□□□□ -0.65
LDLR-203ENST00000535915 TMEM41BQ5BJD5 291 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 IGFL2Q6UWQ7 119 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 TMEM14EPQ6UXP3 125 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 PIP4P1Q86T03 277 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 RFESDQ8TAC1 157 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 MBD3L1Q8WWY6 194 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 ASCL3Q9NQ33 180 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 GAR1Q9NY12 217 aaKnown RBP11.01□□□□□ -0.65
LDLR-203ENST00000535915 CLN8Q9UBY8 286 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 LRRC30A6NM36 301 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 SPCS3P61009 180 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 EIF4EBP1Q13541 118 aaPredicted RBP11.01□□□□□ -0.65
LDLR-203ENST00000535915 KIAA0141Q14154 515 aaPredicted RBP11.01□□□□□ -0.65
LDLR-203ENST00000535915 SLC35E3Q7Z769 313 aa11.01□□□□□ -0.65
LDLR-203ENST00000535915 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms