RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 FAM3DQ96BQ1 224 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 RAX2Q96IS3 184 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 KCTD7Q96MP8 289 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 KCNK15Q9H427 330 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 PLGRKTQ9HBL7 147 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 Q9N2K0 584 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 AP5S1Q9NUS5 200 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 AK3Q9UIJ7 227 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 BLOC1S6Q9UL45 172 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 RAB26Q9ULW5 256 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 AK6Q9Y3D8 172 aaKnown RBP8.44□□□□□ -1.06
CCDC60-202ENST00000535685 V9GY05 133 aa8.44□□□□□ -1.06
CCDC60-202ENST00000535685 IGHV7-81A0A0B4J1V7 117 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 NUDT19A8MXV4 375 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 CT45A6P0DMU7 189 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 CT45A5P0DMU8 189 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 CT45A7P0DMV0 189 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 NAT1P18440 290 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 ZBTB25P24278 435 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 CALRP27797 417 aaKnown RBP8.43□□□□□ -1.06
CCDC60-202ENST00000535685 HLA-DRB3P79483 266 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 FHL3Q13643 280 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 KIAA0141Q14154 515 aaPredicted RBP8.43□□□□□ -1.06
CCDC60-202ENST00000535685 P2RY14Q15391 338 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 SSX1Q16384 188 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 C2orf76Q3KRA6 126 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 C19orf54Q5BKX5 351 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 ZNF660Q6AZW8 331 aaPredicted RBP8.43□□□□□ -1.06
CCDC60-202ENST00000535685 IZUMO2Q6UXV1 221 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 MINDY2Q8NBR6 621 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 OR56B1Q8NGI3 324 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 C4orf3Q8WVX3 66 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 IL1F10Q8WWZ1 152 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 RITA1Q96K30 269 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 UBE2E2Q96LR5 201 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 OR51J1Q9H342 316 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 CHMP1AQ9HD42 196 aaPredicted RBP8.43□□□□□ -1.06
CCDC60-202ENST00000535685 C12orf4Q9NQ89 552 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 RAB22AQ9UL26 194 aa8.43□□□□□ -1.06
CCDC60-202ENST00000535685 TRDV1A0A1B0GX56 115 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 H0YJW9 148 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 MAP2K4P45985 399 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 VEGFCP49767 419 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 GABARAPL2P60520 117 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 DCTN2Q13561 401 aaKnown RBP8.42□□□□□ -1.06
CCDC60-202ENST00000535685 PLAC9Q5JTB6 97 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 LIN54Q6MZP7 749 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 TCTEX1D1Q8N7M0 179 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 ARHGAP5-AS1Q96IT6 56 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 CMSS1Q9BQ75 279 aaKnown RBP8.42□□□□□ -1.06
CCDC60-202ENST00000535685 PECRQ9BY49 303 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 CCDC90BQ9GZT6 254 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 C11orf54Q9H0W9 315 aaPredicted RBP8.42□□□□□ -1.06
CCDC60-202ENST00000535685 NDUFB11Q9NX14 153 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 KIAA1456Q9P272 454 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 GAB2Q9UQC2 676 aa8.42□□□□□ -1.06
CCDC60-202ENST00000535685 TMEM272A0A1B0GTI8 110 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 WI2-2373I1.2A0A1W2PRP0 233 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 TRDCB7Z8K6 153 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 I3L521 148 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 RRHO14718 337 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 PDCD5O14737 125 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 ATP6V0E1O15342 81 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 DENRO43583 198 aaKnown RBP8.41□□□□□ -1.06
CCDC60-202ENST00000535685 RAMP3O60896 148 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 PROP1O75360 226 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 SCTP09683 121 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 SLC2A2P11168 524 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-202ENST00000535685 CNTFRP26992 372 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 CEACAM6P40199 344 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 SERPINB10P48595 397 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 SRSF7Q16629 238 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC60-202ENST00000535685 RPL39P5Q59GN2 51 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 FAM131AQ6UXB0 335 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 LCNL1Q6ZST4 164 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 ZNF491Q8N8L2 437 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-202ENST00000535685 OR4A4PQ8NGN8 299 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 OR5M8Q8NGP6 311 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 HDHD3Q9BSH5 251 aaPredicted RBP8.41□□□□□ -1.06
CCDC60-202ENST00000535685 CENPOQ9BU64 300 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 PARP12Q9H0J9 701 aaKnown RBP8.41□□□□□ -1.06
CCDC60-202ENST00000535685 KCNK7Q9Y2U2 307 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 WASHC3Q9Y3C0 194 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 NUBP2Q9Y5Y2 271 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 DNAH9Q9NYC9 4486 aa8.41□□□□□ -1.06
CCDC60-202ENST00000535685 TRAV41A0A0B4J266 112 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 IGKV1-6A0A0C4DH72 117 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 IFITM5A6NNB3 132 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 RAB27BO00194 218 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 SPDEFO95238 335 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 HOXD3P31249 432 aaPredicted RBP8.4□□□□□ -1.06
CCDC60-202ENST00000535685 CLDN12P56749 244 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 C9orf66Q5T8R8 295 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 Q6ZS49 121 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 SETD6Q8TBK2 473 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 RBMXL1Q96E39 390 aaKnown RBP8.4□□□□□ -1.06
CCDC60-202ENST00000535685 ABHD14BQ96IU4 210 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 CNBD2Q96M20 576 aa8.4□□□□□ -1.06
CCDC60-202ENST00000535685 CABLES2Q9BTV7 478 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms