RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 TMEM123Q8N131 208 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 SLC25A45Q8N413 288 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 PRSS33Q8NF86 280 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 OR5D13Q8NGL4 314 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 CMTM2Q8TAZ6 248 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 ORAOV1Q8WV07 137 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 C22orf15Q8WYQ4 148 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 CORO2AQ92828 525 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 LHX4Q969G2 390 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 TXNDC17Q9BRA2 123 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 ATG101Q9BSB4 218 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 CHRNA10Q9GZZ6 450 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 ARRDC1-AS1Q9H2J1 176 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 RIMS4Q9H426 269 aaPredicted RBP5.59□□□□□ -1.51
USP28-202ENST00000535607 C11orf1Q9H5F2 150 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 TMEM9BQ9NQ34 198 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 STARD5Q9NSY2 213 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 CBLN4Q9NTU7 201 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 IL36GQ9NZH8 169 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 TRAPPC1Q9Y5R8 145 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 R4GN57 208 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 MPDZO75970 2070 aa5.59□□□□□ -1.52
USP28-202ENST00000535607 DNAH14Q0VDD8 3507 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 TRAV39A0A0B4J263 110 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 A8MXE2 369 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 B9A039 149 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 C17orf112F2Z3M2 114 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 F6UZH7 168 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 H0Y980 276 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 ADAM20O43506 726 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 PDE6DO43924 150 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 PDCD6O75340 191 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 NRASP01111 189 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 KRASP01116 189 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 PPYP01298 95 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 SERPINA7P05543 415 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 SERPINE2P07093 398 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 UMODP07911 640 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 TCN2P20062 427 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 MSR1P21757 451 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 MRPS34P82930 218 aaKnown RBP5.58□□□□□ -1.52
USP28-202ENST00000535607 FMODQ06828 376 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 WDR25Q64LD2 544 aaPredicted RBP5.58□□□□□ -1.52
USP28-202ENST00000535607 SLC25A47Q6Q0C1 308 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 WDR74Q6RFH5 385 aaPredicted RBP5.58□□□□□ -1.52
USP28-202ENST00000535607 Q6ZSR3 168 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 C5orf24Q7Z6I8 188 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 KMT5CQ86Y97 462 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 SELENOHQ8IZQ5 122 aaKnown RBP5.58□□□□□ -1.52
USP28-202ENST00000535607 OSR2Q8N2R0 312 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 PATE1Q8WXA2 126 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 TMEM37Q8WXS4 190 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 ADIPOR1Q96A54 375 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 BORCS8Q96FH0 119 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 ZNF845Q96IR2 970 aaPredicted RBP5.58□□□□□ -1.52
USP28-202ENST00000535607 OXGR1Q96P68 337 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 SPACA5Q96QH8 159 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 TBX15Q96SF7 602 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 FAAP24Q9BTP7 215 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 OR2J1Q9GZK6 312 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 WWTR1Q9GZV5 400 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 WNT5BQ9H1J7 359 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 RBKSQ9H477 322 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 TMEM106BQ9NUM4 274 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 MCTS1Q9ULC4 181 aaKnown RBP5.58□□□□□ -1.52
USP28-202ENST00000535607 FUT9Q9Y231 359 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 PIGLQ9Y2B2 252 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 MRPS18CQ9Y3D5 142 aaKnown RBP5.58□□□□□ -1.52
USP28-202ENST00000535607 LHFPL6Q9Y693 200 aa5.58□□□□□ -1.52
USP28-202ENST00000535607 PI4KAP42356 2102 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 IGHV1OR21-1A0A087WYE8 117 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 TRBV9A0A0B4J1U6 114 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 CTXND1A0A1B0GTU2 59 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 LOC102725191A0A1B0GVB3 256 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 A0A1W2PN81 502 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 OR6C6A6NF89 314 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 LIPT2A6NK58 231 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 RNF212BA8MTL3 300 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 FAM90A26D6RGX4 464 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 CHST1O43916 411 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 CST7O76096 145 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 GYPAP02724 150 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 CLPSP04118 112 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 IGKV3-11P04433 115 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 MMP7P09237 267 aaPredicted RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 OR4A8P0C604 315 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 BRS3P32247 399 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 APLNRP35414 380 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 CHRNA7P36544 502 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 CLDN15P56746 228 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 RPS20P60866 119 aaKnown RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 ERVS71-1P61550 626 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 RPL23P62829 140 aaKnown RBP5.57□□□□□ -1.52
USP28-202ENST00000535607 FOXF1Q12946 379 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 MFAP5Q13361 173 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 OR5I1Q13606 314 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 LPAL2Q16609 132 aa5.57□□□□□ -1.52
USP28-202ENST00000535607 LRRC75BQ2VPJ9 315 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms