RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ERVS71-1P61550 626 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 PJVKQ0ZLH3 352 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 ZNF154Q13106 437 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 CEACAM21Q3KPI0 293 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 KLF17Q5JT82 389 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 C10orf91Q5T1B1 145 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 HAGHLQ6PII5 290 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 ZNF818PQ6ZRF7 136 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 LRTM2Q8N967 370 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 RHOFQ9HBH0 211 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 Q9N2K0 584 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 UQCC1Q9NVA1 299 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 RCL1Q9Y2P8 373 aaKnown RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 KIAA2026Q5HYC2 2103 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 TRAV39A0A0B4J263 110 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 A0A1B0GUS0 222 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 CD300LBA8K4G0 201 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 F8W036 122 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 CST4P01036 141 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 IGHV1-46P01743 117 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 MDKP21741 143 aaPredicted RBP6.78□□□□□ -1.32
NEDD8-207ENST00000533242 NFYBP25208 207 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 SULT1A2P50226 295 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 BLOC1S1P78537 153 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 BTNL8Q6UX41 500 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 ETV3LQ6ZN32 361 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 ZDHHC23Q8IYP9 409 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 SECTM1Q8WVN6 248 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 APOBEC3DQ96AK3 386 aaPredicted RBP6.78□□□□□ -1.32
NEDD8-207ENST00000533242 NRIP2Q9BQI9 281 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 EGLN1Q9GZT9 426 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 TREM1Q9NP99 234 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 RCC2Q9P258 522 aaKnown RBP6.78□□□□□ -1.32
NEDD8-207ENST00000533242 ATPIF1Q9UII2 106 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 KCNIP3Q9Y2W7 256 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 INSIG2Q9Y5U4 225 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 C3orf85A0A1B0GTC6 90 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 MPPED1O15442 326 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 TNFSF12O43508 249 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 NXPH3O95157 252 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 ADH4P08319 380 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 SELEP16581 610 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 CAV2P51636 162 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 UCP3P55916 312 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 OR2T2Q6IF00 324 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 FBXW12Q6X9E4 464 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 Q6ZRG5 221 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 C9orf139Q6ZV77 190 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 WDR86Q86TI4 376 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 TBC1D26Q86UD7 250 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 GAPTQ8N292 157 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 OR4D5Q8NGN0 318 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 CCL17Q92583 94 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 C11orf1Q9H5F2 150 aa6.78□□□□□ -1.32
NEDD8-207ENST00000533242 CARHSP1Q9Y2V2 147 aaKnown RBP6.78□□□□□ -1.32
NEDD8-207ENST00000533242 TRAV24A0A0B4J272 114 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 TAAR5O14804 337 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 SPRY3O43610 288 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM50AO95807 157 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 IGHV2-70P01814 119 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 PRKACAP17612 351 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CA6P23280 308 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 GLP1RP43220 463 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 HERV-K104P61576 105 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 PLP2Q04941 152 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 ZNF718Q3SXZ3 478 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 ODF3L1Q8IXM7 274 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CLRN3Q8NCR9 226 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 OR1J1Q8NGS3 322 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 UBALD1Q8TB05 177 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 OR5P3Q8WZ94 311 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 TECTBQ96PL2 329 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 SCRT1Q9BWW7 348 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 MAGT1Q9H0U3 335 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 ARV1Q9H2C2 271 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CCL28Q9NRJ3 127 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 E5RGE8 158 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 TRAPPC2LH3BP13 241 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 HSD17B6O14756 317 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 GAPDHP04406 335 aaKnown RBP6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CD55P08174 381 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 COX5BP10606 129 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CTRB1P17538 263 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CD80P33681 288 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 POLR2GP62487 172 aaKnown RBP eCLIP6.77□□□□□ -1.33
NEDD8-207ENST00000533242 SMCO1Q147U7 214 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 IZUMO4Q1ZYL8 232 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM155Q4W5P6 130 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CXorf66Q5JRM2 361 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-207ENST00000533242 CTRB2Q6GPI1 263 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 IL34Q6ZMJ4 242 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 LGI3Q8N145 548 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 SVBPQ8N300 66 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 SUMF2Q8NBJ7 301 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 UBAC2Q8NBM4 344 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 MRPL30Q8TCC3 161 aaKnown RBP6.77□□□□□ -1.33
NEDD8-207ENST00000533242 WFDC12Q8WWY7 111 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 SAT2Q96F10 170 aaPredicted RBP6.77□□□□□ -1.33
NEDD8-207ENST00000533242 DIRC2Q96SL1 478 aa6.77□□□□□ -1.33
NEDD8-207ENST00000533242 TMEM222Q9H0R3 208 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms