RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 RPL39P5Q59GN2 51 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 FAAP20Q6NZ36 180 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 LHFPL1Q86WI0 220 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 OR56B4Q8NH76 319 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 SECTM1Q8WVN6 248 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 SSMEM1Q8WWF3 244 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 SDHAF2Q9NX18 166 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 A0A0A6YYJ9 748 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 DISC1C4P0D8 188 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 TIMM23O14925 209 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 IGLV2-14P01704 120 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 BRS3P32247 399 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 FAUP35544 74 aaKnown RBP13.63□□□□□ -0.23
SF3B2-211ENST00000531041 INPP1P49441 399 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 FXYD4P59646 89 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 MSMO1Q15800 293 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 PLA1AQ53H76 456 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 AADACL3Q5VUY0 350 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 ZNF57Q68EA5 555 aaPredicted RBP13.63□□□□□ -0.23
SF3B2-211ENST00000531041 PIFOQ8TCI5 191 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 CFHR4Q92496 578 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 NABP2Q9BQ15 211 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 SLC5A7Q9GZV3 580 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 DPAGT1Q9H3H5 408 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 HRASLSQ9HDD0 168 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 CUBNO60494 3623 aa13.63□□□□□ -0.23
SF3B2-211ENST00000531041 SETD2Q9BYW2 2564 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-211ENST00000531041 OR5H14A6NHG9 310 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 HOXA3O43365 443 aaPredicted RBP13.62□□□□□ -0.23
SF3B2-211ENST00000531041 UCP3P55916 312 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 HILS1P60008 231 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 BAMBIQ13145 260 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 TMEM86BQ8N661 226 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 DRAM1Q8N682 238 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 OR5R1Q8NH85 324 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 TERB2Q8NHR7 220 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 BORCS5Q969J3 196 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 C5orf30Q96GV9 206 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 CCL28Q9NRJ3 127 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 ABCB10Q9NRK6 738 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 SLC2A8Q9NY64 477 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
SF3B2-211ENST00000531041 FAM90A9PA6NNJ1 464 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 H3BUX3 64 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 IFNA2P01563 188 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 IGHV4-59P01825 116 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 CT45A6P0DMU7 189 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 CT45A5P0DMU8 189 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 CT45A7P0DMV0 189 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 GNRHRP30968 328 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 RAB13P51153 203 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 SCGB2B2Q4G0G5 96 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 LPCAT3Q6P1A2 487 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 MOB3BQ86TA1 216 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 ZBTB34Q8NCN2 500 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 OR51S1Q8NGJ8 323 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 JMJD8Q96S16 334 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 PRRT1Q99946 306 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 MRPL20Q9BYC9 149 aaKnown RBP13.61□□□□□ -0.23
SF3B2-211ENST00000531041 ESM1Q9NQ30 184 aa13.61□□□□□ -0.23
SF3B2-211ENST00000531041 DNAJC9-AS1A6NH13 148 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 CLDN34H7C241 214 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 M0R1X1 148 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 TCF21O43680 179 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 CD1BP29016 333 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 THNSL2Q86YJ6 484 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 ZDHHC22Q8N966 263 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 AKR1E2Q96JD6 320 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 MCUBQ9NWR8 336 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 SCP2D1Q9UJQ7 156 aa13.6□□□□□ -0.23
SF3B2-211ENST00000531041 NF1P21359 2839 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 BTBD17A6NE02 478 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 DUTP33316 252 aaKnown RBP13.59□□□□□ -0.23
SF3B2-211ENST00000531041 ECI1P42126 302 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 THBS3P49746 956 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 EIF4EBP1Q13541 118 aaPredicted RBP13.59□□□□□ -0.23
SF3B2-211ENST00000531041 SLC9A3R2Q15599 337 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 ZNF818PQ6ZRF7 136 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 DRAXINQ8NBI3 349 aaPredicted RBP13.59□□□□□ -0.23
SF3B2-211ENST00000531041 BVESQ8NE79 360 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 OR5AN1Q8NGI8 311 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 MRGPRFQ96AM1 343 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 ADTRPQ96IZ2 230 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 C7orf50Q9BRJ6 194 aaKnown RBP13.59□□□□□ -0.23
SF3B2-211ENST00000531041 RSRP1Q9BUV0 290 aa13.59□□□□□ -0.23
SF3B2-211ENST00000531041 IGHV3-72A0A0B4J1Y9 119 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 NAP1L6A6NFF2 107 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 UPK1BO75841 260 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 VENTXO95231 258 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 FAM106CPP0CH98 169 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 CD24P25063 80 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 MC5RP33032 325 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 LINC00205P59089 165 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 TAGLNQ01995 201 aaKnown RBP13.58□□□□□ -0.24
SF3B2-211ENST00000531041 EBI3Q14213 229 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 ZNF66Q6ZN08 573 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 SLC38A6Q8IZM9 456 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 ZNF383Q8NA42 475 aa13.58□□□□□ -0.24
SF3B2-211ENST00000531041 OR13C8Q8NGS7 320 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms