RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PDLIM4P50479 330 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 CD81P60033 236 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 PLAURQ03405 335 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 ATP5G2Q06055 141 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 CD300CQ08708 224 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 TMEM45BQ96B21 275 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 MS4A3Q96HJ5 214 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF430Q9H8G1 570 aaPredicted RBP7.3□□□□□ -1.24
CTNND1-227ENST00000530748 FOXJ2Q9P0K8 574 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 AUP1Q9Y679 476 aa7.3□□□□□ -1.24
CTNND1-227ENST00000530748 KCNAB3O43448 404 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 AMY1AP04745 511 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 CDCP2Q5VXM1 449 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 MMD2Q8IY49 270 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 AMELYQ99218 206 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 PITPNC1Q9UKF7 332 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 GPR132Q9UNW8 380 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 HS3ST3B1Q9Y662 390 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 TMSB15BA0A087X1C1 80 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 LOC389332A0A1B0GUA5 103 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 C7orf66A4D0T2 115 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 STAG3L2P0CL84 134 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 DLX1P56177 255 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 SMUG1Q53HV7 270 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 SLC16A13Q7RTY0 426 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 LRRC75AQ8NAA5 344 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 RNF115Q9Y4L5 304 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 FAM90A26D6RGX4 464 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF207O43670 478 aaKnown RBP7.29□□□□□ -1.24
CTNND1-227ENST00000530748 KLF7O75840 302 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-227ENST00000530748 WNT5BQ9H1J7 359 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 DLL3Q9NYJ7 618 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 PPIAL4CA0A0B4J2A2 164 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 LOC101059948A0A1B0GTJ6 334 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 OR4C46A6NHA9 309 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 ZNHIT1O43257 154 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 PPIAL4GP0DN37 164 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 DCAF12L2Q5VW00 463 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF826PQ6ZT77 177 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 BPIFA4PQ86YQ2 179 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 STPG3Q8N7X2 389 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF383Q8NA42 475 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 KLF14Q8TD94 323 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-227ENST00000530748 IGKV1D-42A0A075B6H8 117 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 LOC105371242A0A075B767 164 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 GCM2O75603 506 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-227ENST00000530748 CD74P04233 296 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 RPLP1P05386 114 aaKnown RBP7.29□□□□□ -1.24
CTNND1-227ENST00000530748 C10orf128Q5T292 105 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 UNQ5815/PRO19632Q6UWF5 114 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 GPR146Q96CH1 333 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 EAF1Q96JC9 268 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-227ENST00000530748 TMEM140Q9NV12 185 aa7.29□□□□□ -1.24
CTNND1-227ENST00000530748 ELF5Q9UKW6 265 aaPredicted RBP7.29□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF729A6NN14 1252 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 SMIM6P0DI80 62 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 COMPP49747 757 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 MFAP4P55083 255 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 SELENOTP62341 195 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 RRN3P1Q2M238 152 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 ZMAT5Q9UDW3 170 aaKnown RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 IGHV3-72A0A0B4J1Y9 119 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 HLA-DQB1P01920 261 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 RPS20P60866 119 aaKnown RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 OR5P3Q8WZ94 311 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 Q96M66 194 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 TXNDC17Q9BRA2 123 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 LINC00470Q9BZP3 86 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 MYO10Q9HD67 2058 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 TTC3P53804 2025 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 PSME4Q14997 1843 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 TMEM229AB2RXF0 380 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 PF4P02776 101 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 HSPB1P04792 205 aaKnown RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 LINC00869P0C866 280 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 MAS1LP35410 378 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 PKIAP61925 76 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 KLRB1Q12918 225 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 IBA57Q5T440 356 aaKnown RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 LSM10Q969L4 123 aaKnown RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 SLC25A33Q9BSK2 321 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 KCNE5Q9UJ90 142 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 LOC285556D6RIA3 1793 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 IFITM10A6NMD0 228 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 SRSF9Q13242 221 aaKnown RBP eCLIP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 FAM53AQ6NSI3 398 aaPredicted RBP7.28□□□□□ -1.24
CTNND1-227ENST00000530748 OVCH2Q7RTZ1 564 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 CTHRC1Q96CG8 243 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 ELOVL1Q9BW60 279 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 WDR90Q96KV7 1748 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 COTL1Q14019 142 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 ZNF146Q15072 292 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 ABHD12Q8N2K0 398 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 EEF1AKMT3Q96AZ1 226 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 TMEM186Q96B77 213 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 GUCD1Q96NT3 240 aa7.28□□□□□ -1.24
CTNND1-227ENST00000530748 WFDC6Q9BQY6 131 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms