RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 SDHAF2Q9NX18 166 aa17.09■□□□□ 0.33
CAPN1-220ENST00000530567 ZNF221Q9UK13 617 aa17.09■□□□□ 0.33
CAPN1-220ENST00000530567 GAB2Q9UQC2 676 aa17.09■□□□□ 0.33
CAPN1-220ENST00000530567 FAM181BA6NEQ2 426 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 PPYP01298 95 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 IGLV2-14P01704 120 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 SNRNP70P08621 437 aaKnown RBP17.08■□□□□ 0.32
CAPN1-220ENST00000530567 CT45A6P0DMU7 189 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 CT45A5P0DMU8 189 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 CT45A7P0DMV0 189 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 PTBP1P26599 531 aaKnown RBP eCLIP17.08■□□□□ 0.32
CAPN1-220ENST00000530567 LUMP51884 338 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-220ENST00000530567 SPANXN2Q5MJ10 180 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 VAX1Q5SQQ9 334 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 DHRS11Q6UWP2 260 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 TMEM219Q86XT9 240 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 THNSL2Q86YJ6 484 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 S1PR3Q99500 378 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 PTTG2Q9NZH5 202 aa17.08■□□□□ 0.32
CAPN1-220ENST00000530567 ZNF107Q9UII5 783 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-220ENST00000530567 M0QYG6 137 aa17.07■□□□□ 0.32
CAPN1-220ENST00000530567 CD3DP04234 171 aa17.07■□□□□ 0.32
CAPN1-220ENST00000530567 ACTBL2Q562R1 376 aa17.07■□□□□ 0.32
CAPN1-220ENST00000530567 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-220ENST00000530567 TMEM229BQ8NBD8 167 aa17.07■□□□□ 0.32
CAPN1-220ENST00000530567 CAPSLQ8WWF8 208 aa17.07■□□□□ 0.32
CAPN1-220ENST00000530567 TAF15Q92804 592 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAPN1-220ENST00000530567 TRIM63Q969Q1 353 aa17.07■□□□□ 0.32
CAPN1-220ENST00000530567 TINAGL1Q9GZM7 467 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-220ENST00000530567 SRRQ9GZT4 340 aa17.07■□□□□ 0.32
CAPN1-220ENST00000530567 RBM7Q9Y580 266 aaKnown RBP17.07■□□□□ 0.32
CAPN1-220ENST00000530567 IGKV1D-33P01593 117 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 IGKV1-33P01594 117 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 CD74P04233 296 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 TBPP20226 339 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 CD1BP29016 333 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 LINC00205P59089 165 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 EBI3Q14213 229 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 PYDC2Q56P42 97 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 LIAT1Q6ZQX7 453 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 PITPNC1Q9UKF7 332 aa17.06■□□□□ 0.32
CAPN1-220ENST00000530567 M0R1X1 148 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 TAS2R19P59542 299 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 GLDNQ6ZMI3 551 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-220ENST00000530567 MFSD4AQ8N468 514 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 Q8N6K4 173 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 ZNF645Q8N7E2 425 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 ZNF383Q8NA42 475 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 DRAXINQ8NBI3 349 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-220ENST00000530567 OR4D10Q8NGI6 311 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 MOB3AQ96BX8 217 aa17.05■□□□□ 0.32
CAPN1-220ENST00000530567 ZNF2Q9BSG1 426 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-220ENST00000530567 FAM106CPP0CH98 169 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 RPL15P61313 204 aaKnown RBP17.04■□□□□ 0.32
CAPN1-220ENST00000530567 RELBQ01201 579 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 RNASE10Q5GAN6 216 aaKnown RBP17.04■□□□□ 0.32
CAPN1-220ENST00000530567 Q8N402 240 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 OR5AN1Q8NGI8 311 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 EAF1Q96JC9 268 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-220ENST00000530567 SDHCQ99643 169 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-220ENST00000530567 THAP7Q9BT49 309 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-220ENST00000530567 FXYD6Q9H0Q3 95 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 H0YJW9 148 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 CSF1P09603 554 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 FXYD4P59646 89 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 EIF4EBP1Q13541 118 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-220ENST00000530567 KRTAP21-3Q3LHN1 58 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 STEAP1BQ6NZ63 245 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 LINC00299Q6ZSB3 139 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 OR6F1Q8NGZ6 308 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 SECTM1Q8WVN6 248 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 RBM14Q96PK6 669 aaKnown RBP17.04■□□□□ 0.32
CAPN1-220ENST00000530567 AKIP1Q9NQ31 210 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 C1RLQ9NZP8 487 aa17.04■□□□□ 0.32
CAPN1-220ENST00000530567 ANKRD20A5PA0PJZ0 165 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 OR2F2O95006 317 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 HES1Q14469 280 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 TMEM17Q86X19 198 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 SLC25A33Q9BSK2 321 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 SLC5A7Q9GZV3 580 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 CCL28Q9NRJ3 127 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 TAS2R8Q9NYW2 309 aa17.03■□□□□ 0.32
CAPN1-220ENST00000530567 OR5H14A6NHG9 310 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 SLC22A5O76082 557 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 RAB3DO95716 219 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 ZNF735P0CB33 412 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 TMEM11P17152 192 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 DUTP33316 252 aaKnown RBP17.02■□□□□ 0.31
CAPN1-220ENST00000530567 HERV-K104P61576 105 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 HNF4GQ14541 408 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 MSMO1Q15800 293 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 AADACL3Q5VUY0 350 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 DHRS7BQ6IAN0 325 aaPredicted RBP17.02■□□□□ 0.31
CAPN1-220ENST00000530567 FAAP20Q6NZ36 180 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 LHFPL1Q86WI0 220 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 ARRDC1Q8N5I2 433 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 OR2T10Q8NGZ9 312 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 C19orf24Q9BVV8 132 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 RAB18Q9NP72 206 aa17.02■□□□□ 0.31
CAPN1-220ENST00000530567 LINC00473A8K010 186 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms