RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ZNF57Q68EA5 555 aaPredicted RBP8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 DMKNQ6E0U4 476 aaPredicted RBP8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 RAB12Q6IQ22 244 aa8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 STPG3Q8N7X2 389 aa8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 OR8J1Q8NGP2 316 aa8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 FBLIM1Q8WUP2 373 aa8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 MRPL48Q96GC5 212 aaKnown RBP8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 HSPG2P98160 4391 aa8.63□□□□□ -1.03
AMBRA1-207ENST00000529553 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 TRAV25A0A0B4J276 109 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 FAM90A7PA6NKC0 464 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 FAM223BA6NKX1 122 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 FAM90A23PA8MXZ1 464 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 J3QLW9 94 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 CPEP16870 476 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 ZNF19P17023 458 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 SERPINA2P20848 420 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 ZNF93P35789 620 aaPredicted RBP8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 CAPGP40121 348 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 RPS16P62249 146 aaKnown RBP8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 SSBP2P81877 361 aaPredicted RBP8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 ATP5G2Q06055 141 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 RBMS2Q15434 407 aaKnown RBP8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 TM4SF20Q53R12 229 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 GLDNQ6ZMI3 551 aaPredicted RBP8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 FAM223AQ8IWN6 122 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 TMEM61Q8N0U2 210 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 OR5AK2Q8NH90 309 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 C11orf45Q8TAV5 145 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 TMEM138Q9NPI0 162 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 COA4Q9NYJ1 87 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 STEAP1Q9UHE8 339 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 PEX16Q9Y5Y5 336 aa8.62□□□□□ -1.03
AMBRA1-207ENST00000529553 B2RBV5 119 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 ITGB1BP1O14713 200 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 TUSC2O75896 110 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 FUT3P21217 361 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 RPL39P5Q59GN2 51 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 ACBD7Q8N6N7 88 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 CCDC197Q8NCU1 140 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 C4orf36Q96KX1 117 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 AGMATQ9BSE5 352 aa8.61□□□□□ -1.03
AMBRA1-207ENST00000529553 TRBV9A0A0B4J1U6 114 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 ST8SIA5O15466 376 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 XRCC3O43542 346 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 GGCTO75223 188 aaKnown RBP8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 RBMXL2O75526 392 aaKnown RBP8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 DCTN3O75935 186 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 IGKV1-16P04430 117 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 CD2P06729 351 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 CRYGBP07316 175 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 T-ENOLP0DO92 83 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 NANOS2P60321 138 aaKnown RBP8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 RHOGP84095 191 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 DEFA5Q01523 94 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 SLC22A6Q4U2R8 563 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 PDPNQ86YL7 162 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 SLC38A6Q8IZM9 456 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 SYS1Q8N2H4 156 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 ADAD2Q8NCV1 583 aaKnown RBP8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 OR14A2Q96R54 314 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 AKIP1Q9NQ31 210 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 TAS2R4Q9NYW5 299 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 ABRACLQ9P1F3 81 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 ZNF230Q9UIE0 474 aaPredicted RBP8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 DMRT1Q9Y5R6 373 aa8.6□□□□□ -1.03
AMBRA1-207ENST00000529553 A0A1W2PP11 408 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 RTL8CO15255 209 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 FKBP6O75344 327 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 OR9G9P0C7N8 305 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 BDKRB2P30411 391 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 PJVKQ0ZLH3 352 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 RIPK1Q13546 671 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 EXOSC2Q13868 293 aaKnown RBP8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 HMGN3Q15651 99 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 SLC25A30Q5SVS4 291 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 DDI2Q5TDH0 399 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 KDM4DQ6B0I6 523 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 OR2C3Q8N628 320 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 NECAP1Q8NC96 275 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 OR1L6Q8NGR2 347 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 KCNG3Q8TAE7 436 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 MRPL30Q8TCC3 161 aaKnown RBP8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 TRUB1Q8WWH5 349 aaKnown RBP8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 FAM46BQ96A09 425 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 PDCD1LG2Q9BQ51 273 aa8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 C11orf68Q9H3H3 251 aaKnown RBP8.59□□□□□ -1.03
AMBRA1-207ENST00000529553 UBE2QL1A1L167 161 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 H3BNX3 289 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 OR2C1O95371 312 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 IGLV2-23P01705 113 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 CTRB1P17538 263 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 EDN2P20800 178 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 PPP3R1P63098 170 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 FAM106AQ4KMX7 169 aa8.58□□□□□ -1.04
AMBRA1-207ENST00000529553 GLT8D1Q68CQ7 371 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms