RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DEFB127Q9H1M4 99 aa4.04□□□□□ -1.76
PCF11-202ENST00000528336 MTFP1Q9UDX5 166 aa4.04□□□□□ -1.76
PCF11-202ENST00000528336 OR12D3Q9UGF7 316 aa4.04□□□□□ -1.76
PCF11-202ENST00000528336 DKKL1Q9UK85 242 aa4.04□□□□□ -1.76
PCF11-202ENST00000528336 SLC35A3Q9Y2D2 325 aa4.04□□□□□ -1.76
PCF11-202ENST00000528336 TEX50A0A1B0GTY4 177 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 RBFOX3A6NFN3 312 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 GPR75O95800 540 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 HSPB1P04792 205 aaKnown RBP4.03□□□□□ -1.76
PCF11-202ENST00000528336 ESDP10768 282 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 ERGP11308 486 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 VDAC1P21796 283 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 LGALS7P47929 136 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 DIO3P55073 304 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 VSX2P58304 361 aaPredicted RBP4.03□□□□□ -1.76
PCF11-202ENST00000528336 HBG1P69891 147 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 HBG2P69892 147 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 ZNF266Q14584 549 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 IGFL2Q6UWQ7 119 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 ZNF620Q6ZNG0 422 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 MOB1BQ7L9L4 216 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 STRADAQ7RTN6 431 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 NEGR1Q7Z3B1 354 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 ZNF561Q8N587 486 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 NKAPP1Q8N9T2 125 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 JOSD2Q8TAC2 188 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 MCEEQ96PE7 176 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 SLIRPQ9GZT3 109 aaKnown RBP4.03□□□□□ -1.76
PCF11-202ENST00000528336 LINC00597Q9H2U6 94 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 SRMSQ9H3Y6 488 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 ZNF702PQ9H963 129 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 ISG20L2Q9H9L3 353 aaKnown RBP4.03□□□□□ -1.76
PCF11-202ENST00000528336 IDI2-AS1Q9NZ38 188 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 DOK5Q9P104 306 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 C14orf166Q9Y224 244 aaKnown RBP4.03□□□□□ -1.76
PCF11-202ENST00000528336 ORC6Q9Y5N6 252 aa4.03□□□□□ -1.76
PCF11-202ENST00000528336 F5P12259 2224 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 TRIOO75962 3097 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 MYH10P35580 1976 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 ZNF638Q14966 1978 aaKnown RBP4.02□□□□□ -1.77
PCF11-202ENST00000528336 PQLC2LA1A4F0 135 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 OR4C46A6NHA9 309 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 GCM2O75603 506 aaPredicted RBP4.02□□□□□ -1.77
PCF11-202ENST00000528336 SERF1AO75920 110 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 PROSCO94903 275 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 EPPINO95925 133 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 GKN3PP0CG01 181 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 GABRA1P14867 456 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 ZNF708P17019 499 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 VDAC2P45880 294 aaPredicted RBP4.02□□□□□ -1.77
PCF11-202ENST00000528336 REG1BP48304 166 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 CACNG7P62955 275 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 EMX1Q04741 257 aaPredicted RBP4.02□□□□□ -1.77
PCF11-202ENST00000528336 TSPO2Q5TGU0 170 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 TEX36Q5VZQ5 186 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 UGT2A3Q6UWM9 527 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 TEX43Q6ZNM6 134 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 OR10D3Q8NH80 312 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 LINC01006Q8NI28 216 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 IL22RA2Q969J5 263 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 HAUS1Q96CS2 278 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 FMC1Q96HJ9 113 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 BMFQ96LC9 184 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 CMSS1Q9BQ75 279 aaKnown RBP4.02□□□□□ -1.77
PCF11-202ENST00000528336 C19orf24Q9BVV8 132 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 KIFC1Q9BW19 673 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 MROQ9BYG7 248 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 CHST5Q9GZS9 411 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 RRAGDQ9NQL2 400 aaPredicted RBP4.02□□□□□ -1.77
PCF11-202ENST00000528336 ANAPC11Q9NYG5 84 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 ZNF226Q9NYT6 803 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 UGT2A1Q9Y4X1 527 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 HSPB11Q9Y547 144 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 OBSL1O75147 1896 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 NUP210Q8TEM1 1887 aaPredicted RBP4.02□□□□□ -1.77
PCF11-202ENST00000528336 MYO16Q9Y6X6 1858 aa4.02□□□□□ -1.77
PCF11-202ENST00000528336 DENND4CQ5VZ89 1909 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 ANAPC1Q9H1A4 1944 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 EXOC1LA0A1B0GW35 172 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 IGSF23A1L1A6 192 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 XKRYO14609 159 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 CYB5R3P00387 301 aaPredicted RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 TFPTP0C1Z6 253 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 GZMHP20718 246 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 BTCP35070 178 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 GGT2P36268 569 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 TCTAP57738 103 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 RPS23P62266 143 aaKnown RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 SELENOTP62341 195 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 RPS21P63220 83 aaKnown RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 FZD2Q14332 565 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 CDK10Q15131 360 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 RSU1Q15404 277 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 LRRC36Q1X8D7 754 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 CYB5R2Q6BCY4 276 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 ELP2Q6IA86 826 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 C5orf46Q6UWT4 87 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 GRINAQ7Z429 371 aa4.01□□□□□ -1.77
PCF11-202ENST00000528336 C14orf178Q8N769 122 aaPredicted RBP4.01□□□□□ -1.77
PCF11-202ENST00000528336 TNFAIP8L1Q8WVP5 186 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms