RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 LRRC74AQ0VAA2 488 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 DIAPH2-AS1Q14236 149 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 FAM159AQ6UWV7 190 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 DRAM2Q6UX65 266 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 TRAPPC6BQ86SZ2 158 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 ANGPTL5Q86XS5 388 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 RNF148Q8N7C7 305 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 ZNF781Q8N8C0 355 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 SAMD12Q8N8I0 201 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 OR56B1Q8NGI3 324 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 AQP3Q92482 292 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 GALNT14Q96FL9 552 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 SPACA5Q96QH8 159 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 MBOAT4Q96T53 435 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 YTHDF1Q9BYJ9 559 aaKnown RBP4.78□□□□□ -1.64
NEDD8-203ENST00000524927 OR51I2Q9H344 312 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 MEPEQ9NQ76 525 aaPredicted RBP4.78□□□□□ -1.64
NEDD8-203ENST00000524927 BTNL2Q9UIR0 455 aa4.78□□□□□ -1.64
NEDD8-203ENST00000524927 IGHV1-3A0A0C4DH29 117 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 H7C1C5 153 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 K7EQG2 157 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 NOS1APO75052 506 aaPredicted RBP4.77□□□□□ -1.65
NEDD8-203ENST00000524927 HLA-DRB1P01911 266 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 MT-ND1P03886 318 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 ZCCHC18P0CG32 403 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 CD1BP29016 333 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 CD40LGP29965 261 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 BLVRBP30043 206 aaPredicted RBP4.77□□□□□ -1.65
NEDD8-203ENST00000524927 FUSP35637 526 aaKnown RBP eCLIP4.77□□□□□ -1.65
NEDD8-203ENST00000524927 LCN6P62502 163 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 ZNF816Q0VGE8 651 aaPredicted RBP4.77□□□□□ -1.65
NEDD8-203ENST00000524927 PRDX4Q13162 271 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 EDDM3AQ14507 147 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 RPEL1Q2QD12 228 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 MOB3BQ86TA1 216 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 TMEM61Q8N0U2 210 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 YIPF7Q8N8F6 280 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 Q8NAQ8 132 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 FNDC5Q8NAU1 212 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 HAVCR2Q8TDQ0 301 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 MS4A14Q96JA4 679 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 SCRT1Q9BWW7 348 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 NMNAT2Q9BZQ4 307 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 FGF23Q9GZV9 251 aaPredicted RBP4.77□□□□□ -1.65
NEDD8-203ENST00000524927 CST11Q9H112 138 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 TMEM38AQ9H6F2 299 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 TAS2R3Q9NYW6 316 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 TMEM216Q9P0N5 145 aa4.77□□□□□ -1.65
NEDD8-203ENST00000524927 IGHV7-81A0A0B4J1V7 117 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 IGHV3-72A0A0B4J1Y9 119 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 PRSS37A4D1T9 235 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 PGRMC1O00264 195 aaKnown RBP4.76□□□□□ -1.65
NEDD8-203ENST00000524927 XKRYO14609 159 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 TPST1O60507 370 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 SLC16A7O60669 478 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 CST4P01036 141 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 FUT3P21217 361 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 CFL1P23528 166 aaKnown RBP4.76□□□□□ -1.65
NEDD8-203ENST00000524927 GNG3P63215 75 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 MS4A2Q01362 244 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 DPY19L2P2Q6ZN68 376 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 ZNF621Q6ZSS3 439 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 LCA5Q86VQ0 697 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 TPRX1Q8N7U7 411 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 ZNRF2Q8NHG8 242 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 RASSF5Q8WWW0 418 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 TESCQ96BS2 214 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 PANX1Q96RD7 426 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 MCHR1Q99705 422 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 VGLL1Q99990 258 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 CABLES2Q9BTV7 478 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 CHRDL1Q9BU40 450 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 OCR1Q9BZK8 76 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 Q9HAA7 133 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 ADGRL4Q9HBW9 690 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 FIS1Q9Y3D6 152 aa4.76□□□□□ -1.65
NEDD8-203ENST00000524927 RPL36Q9Y3U8 105 aaKnown RBP4.76□□□□□ -1.65
NEDD8-203ENST00000524927 TRGV10A0A0A0MS01 117 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 TEX48A0A1B0GUV7 120 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 EI24O14681 340 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 HSD17B6O14756 317 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 TRGV3P03979 118 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 GAPDHP04406 335 aaKnown RBP4.75□□□□□ -1.65
NEDD8-203ENST00000524927 FOLR2P14207 255 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 ERP29P30040 261 aaKnown RBP4.75□□□□□ -1.65
NEDD8-203ENST00000524927 GPM6AP51674 278 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 CD300CQ08708 224 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 TMEM267Q0VDI3 215 aaPredicted RBP4.75□□□□□ -1.65
NEDD8-203ENST00000524927 EIF2B1Q14232 305 aaKnown RBP4.75□□□□□ -1.65
NEDD8-203ENST00000524927 C12orf74Q32Q52 190 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 CD200R1LQ6Q8B3 271 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 RDH10Q8IZV5 341 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 LRRC75AQ8NAA5 344 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 TMEM104Q8NE00 496 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 OR4D6Q8NGJ1 314 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 TWIST2Q8WVJ9 160 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 JPT2Q9H910 190 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 ROPN1Q9HAT0 212 aaPredicted RBP4.75□□□□□ -1.65
NEDD8-203ENST00000524927 HES4Q9HCC6 221 aa4.75□□□□□ -1.65
NEDD8-203ENST00000524927 PEF1Q9UBV8 284 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms