RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DBX2Q6ZNG2 339 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 SLC2A8Q9NY64 477 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF737O75373 536 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 MELTFP08582 738 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 TM2D1Q9BX74 207 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 DOCK10Q96BY6 2186 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 H0YL77 283 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 J3QR06 171 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 F12P00748 615 aaPredicted RBP11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 HLA-GP17693 338 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 RHOBP62745 196 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 NOTCH3Q9UM47 2321 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 WISP1O95388 367 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 CD40P25942 277 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 MMDQ15546 238 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 TCEAL7Q9BRU2 100 aa11.14□□□□□ -0.63
PCDHGB1-201ENST00000523390 C1QL1O75973 258 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 GFRA1P56159 465 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 H3F3AP84243 136 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 MEGF10Q96KG7 1140 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 ABCA1O95477 2261 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 NUBP1P53384 320 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 FOXF2Q12947 444 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 SPACA3Q8IXA5 215 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 FGFRL1Q8N441 504 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 GCSAMQ8N6F7 178 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 NABP1Q96AH0 204 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 NIT2Q9NQR4 276 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 TIMM9Q9Y5J7 89 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 MFSD2BA6NFX1 497 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 HPRT1P00492 218 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 C1orf162Q8NEQ5 155 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR52M1Q8NGK5 317 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 SH2D2AQ9NP31 389 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 TNFRSF19Q9NS68 423 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 NUP210Q8TEM1 1887 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 KIF26AQ9ULI4 1882 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 RBFOX3A6NFN3 312 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 CNN1P51911 297 aaKnown RBP11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 NHLRC3Q5JS37 347 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF660Q6AZW8 331 aaPredicted RBP11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 ETFRF1Q6IPR1 90 aa11.13□□□□□ -0.63
PCDHGB1-201ENST00000523390 DEDDO75618 318 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 FHL1Q13642 323 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 BLNKQ8WV28 456 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 SLC25A28Q96A46 364 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 BSCL2Q96G97 398 aaPredicted RBP11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 SLC45A2Q9UMX9 530 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 IGKV3D-15A0A087WSY6 115 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 TMEM218A2RU14 115 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 BRS3P32247 399 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 C2orf68Q2NKX9 166 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 FAM78BQ5VT40 261 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 ATRAIDQ6UW56 229 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 SMIM15Q7Z3B0 74 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 MUC15Q8N387 334 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 PAQR4Q8N4S7 273 aaPredicted RBP11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF645Q8N7E2 425 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 HILPDAQ9Y5L2 63 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 F2RL2O00254 374 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 SS18L1O75177 396 aaPredicted RBP11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR5B3Q8NH48 314 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 DCTN5Q9BTE1 182 aa11.12□□□□□ -0.63
PCDHGB1-201ENST00000523390 DLL1O00548 723 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 CCL1P22362 96 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 CRYGSP22914 178 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 LYZP61626 148 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 DRAM1Q8N682 238 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 TP53RKQ96S44 253 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 PARD6AQ9NPB6 346 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF320A2RRD8 509 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 E9PQ18 207 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 RAB4AP20338 218 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 GTF3C1Q12789 2109 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF66Q6ZN08 573 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 ZNF524Q96C55 264 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 TMUB1Q9BVT8 246 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 C12orf77C9JDV5 145 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 ERVFC1-1P60608 527 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 BSPH1Q075Z2 132 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 SELENOHQ8IZQ5 122 aaKnown RBP11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 RSG1Q9BU20 258 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR2A4O95047 310 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 SCGB1D1O95968 90 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 ACP7Q6ZNF0 438 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR2A7Q96R45 310 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 BARX1Q9HBU1 254 aaPredicted RBP11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 THYN1Q9P016 225 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 OR51B2Q9Y5P1 312 aa11.11□□□□□ -0.63
PCDHGB1-201ENST00000523390 C2orf16Q68DN1 1984 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms