RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ST8SIA5O15466 376 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 OR2C1O95371 312 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 MAS1P04201 325 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 IGKV1-16P04430 117 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 APELAP0DMC3 54 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 DMKNQ6E0U4 476 aaPredicted RBP10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 BTNL8Q6UX41 500 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 Q6ZR54 194 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 FAM223AQ8IWN6 122 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 OR2C3Q8N628 320 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 OR51A2Q8NGJ7 313 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 IL4I1Q96RQ9 567 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 SULT4A1Q9BR01 284 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 PRRG3Q9BZD7 231 aa10.15□□□□□ -0.78
NKX3-1-202ENST00000523261 A0A1W2PP11 408 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 MCRIP1C9JLW8 97 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 RAB29O14966 203 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 DEFB4AO15263 64 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 GGCTO75223 188 aaKnown RBP10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 TUSC2O75896 110 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 S1PR2O95136 353 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 RAP2AP10114 183 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 SERPINA2P20848 420 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 ATP5G2Q06055 141 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 SPATS1Q496A3 300 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 PVRIGQ6DKI7 326 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 ZNF529Q6P280 563 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 ZNF554Q86TJ5 538 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 GPHB5Q86YW7 130 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 OR11H2Q8NH07 326 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 METTL9Q9H1A3 318 aa10.14□□□□□ -0.79
NKX3-1-202ENST00000523261 TRBV9A0A0B4J1U6 114 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 A8MWP6 167 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 PRH1P02810 166 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 HTR1AP08908 422 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 OR9G9P0C7N8 305 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 P0DMU3 169 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 CPEP16870 476 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 ODF3L2Q3SX64 289 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 SLC38A6Q8IZM9 456 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 FAM46BQ96A09 425 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 PELI1Q96FA3 418 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 GALNT14Q96FL9 552 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 CYYR1Q96J86 154 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 SPACA1Q9HBV2 294 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 KCNIP1Q9NZI2 227 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 GMPPBQ9Y5P6 360 aa10.13□□□□□ -0.79
NKX3-1-202ENST00000523261 SRRM2Q9UQ35 2752 aaKnown RBP10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 GNGT2O14610 69 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 SHOXO15266 292 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 CA11O75493 328 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 SC5DO75845 299 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 CRYGBP07316 175 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 RAB3AP20336 220 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 MAP2K4P45985 399 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 RAB12Q6IQ22 244 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 RBPMS2Q6ZRY4 209 aaKnown RBP10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 NR2C2APQ86WQ0 139 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 ABHD14BQ96IU4 210 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 RNF126Q9BV68 326 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 HRH4Q9H3N8 390 aa10.12□□□□□ -0.79
NKX3-1-202ENST00000523261 FAM90A7PA6NKC0 464 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 IGLV2-23P01705 113 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 SCTP09683 121 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 MNAT1P51948 309 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 LINC00205P59089 165 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 SOHLH1Q5JUK2 328 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 FAM209BQ5JX69 171 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 C12orf73Q69YU5 71 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 DEFB107AQ8IZN7 70 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 DRAXINQ8NBI3 349 aaPredicted RBP10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 GALMQ96C23 342 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 JAM3Q9BX67 310 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 PAK1IP1Q9NWT1 392 aaPredicted RBP10.11□□□□□ -0.79
NKX3-1-202ENST00000523261 DNAH5Q8TE73 4624 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 ZNF320A2RRD8 509 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 PROP1O75360 226 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 T-ENOLP0DO92 83 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 GTF2F2P13984 249 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 ATP6V1E1P36543 226 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 MED22Q15528 200 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 SLC22A6Q4U2R8 563 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 SLC25A30Q5SVS4 291 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 DHFR2Q86XF0 187 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 ZNF383Q8NA42 475 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 MRPL30Q8TCC3 161 aaKnown RBP10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 DNAJC9Q8WXX5 260 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 PHB2Q99623 299 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 AGMATQ9BSE5 352 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 EXOSC1Q9Y3B2 195 aaKnown RBP10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 PEX16Q9Y5Y5 336 aa10.1□□□□□ -0.79
NKX3-1-202ENST00000523261 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
NKX3-1-202ENST00000523261 ZAR1LA6NP61 321 aa10.09□□□□□ -0.79
NKX3-1-202ENST00000523261 MPTX1A8MV57 137 aa10.09□□□□□ -0.79
NKX3-1-202ENST00000523261 SLC16A6O15403 523 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms