RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
VPS13B-210ENST00000521932 IFT46Q9NQC8 304 aa6.74□□□□□ -1.33
VPS13B-210ENST00000521932 NECAP2Q9NVZ3 263 aa6.74□□□□□ -1.33
VPS13B-210ENST00000521932 OR1A1Q9P1Q5 309 aa6.74□□□□□ -1.33
VPS13B-210ENST00000521932 DPM3Q9P2X0 92 aa6.74□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF107Q9UII5 783 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-210ENST00000521932 GAB2Q9UQC2 676 aa6.74□□□□□ -1.33
VPS13B-210ENST00000521932 RBMX2Q9Y388 322 aaKnown RBP6.74□□□□□ -1.33
VPS13B-210ENST00000521932 AMMECR1Q9Y4X0 333 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-210ENST00000521932 SOX21Q9Y651 276 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-210ENST00000521932 NSD1Q96L73 2696 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-210ENST00000521932 A0A0A6YYJ9 748 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 A0A1W2PPE3 182 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 VGLL3A8MV65 326 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 TUSC2O75896 110 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 FBP1P09467 338 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 RCVRNP35243 200 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 CEACAM3P40198 252 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 GNG10P50151 68 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 RAB7AP51149 207 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 DYNLT3P51808 116 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 ARPC4P59998 168 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 ACTBP60709 375 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 ACTG1P63261 375 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 DGCR2P98153 550 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 MADCAM1Q13477 382 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 DYRK1AQ13627 763 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 CDK10Q15131 360 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF79Q15937 498 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 SSX2Q16385 188 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 AANATQ16613 207 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 TEPPQ6URK8 271 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 LDLRAD3Q86YD5 345 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 ODF3L1Q8IXM7 274 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 H1FOOQ8IZA3 346 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-210ENST00000521932 DYNAPQ8N1N2 210 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 OR2AK2Q8NG84 335 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 OR10X1Q8NGY0 326 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 SLC6A7Q99884 636 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 GINS4Q9BRT9 223 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 ABHD14AQ9BUJ0 271 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 C11orf54Q9H0W9 315 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-210ENST00000521932 RDH8Q9NYR8 311 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 TAS2R8Q9NYW2 309 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 PIPOXQ9P0Z9 390 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 ZNRD1Q9P1U0 126 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 FAM96BQ9Y3D0 163 aa6.73□□□□□ -1.33
VPS13B-210ENST00000521932 SONP18583 2426 aaKnown RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 NAV3Q8IVL0 2385 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 RAB29O14966 203 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 PROP1O75360 226 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 CD74P04233 296 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 FCER2P06734 321 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 OR5H8P0DN80 308 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 TBPP20226 339 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 HLA-DMAP28067 261 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 IER3P46695 156 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 RFX2P48378 723 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 TAS2R46P59540 309 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 HILS1P60008 231 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF45Q02386 682 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF816Q0VGE8 651 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 HABP2Q14520 560 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 VAX1Q5SQQ9 334 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 TPTE2P1Q5T6R2 138 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF660Q6AZW8 331 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 FAM71F2Q6NXP2 309 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 ETV3LQ6ZN32 361 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF833PQ6ZTB9 187 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 Q8N402 240 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 TMEM229BQ8NBD8 167 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 PIFOQ8TCI5 191 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF418Q8TF45 676 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 RTN4IP1Q8WWV3 396 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 ZNF251Q9BRH9 671 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 THAP7Q9BT49 309 aaPredicted RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 SRRQ9GZT4 340 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 PARP12Q9H0J9 701 aaKnown RBP6.72□□□□□ -1.33
VPS13B-210ENST00000521932 IFI27L2Q9H2X8 130 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 OR2W1Q9Y3N9 320 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 HILPDAQ9Y5L2 63 aa6.72□□□□□ -1.33
VPS13B-210ENST00000521932 NIPBLQ6KC79 2804 aaeCLIP6.71□□□□□ -1.342e-7■■■□□ 16.1
VPS13B-210ENST00000521932 MDFIC2A0A1B0GVS7 189 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 ANKRD20A5PA0PJZ0 165 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 FAM90A9PA6NNJ1 464 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 ZNF736B4DX44 427 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-210ENST00000521932 CLDN34H7C241 214 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 HSD17B6O14756 317 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 TXNL1O43396 289 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 LANCL1O43813 399 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 IFNA2P01563 188 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 PMP2P02689 132 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 CD3DP04234 171 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 GAPDHP04406 335 aaKnown RBP6.71□□□□□ -1.34
VPS13B-210ENST00000521932 CSF1P09603 554 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 OR8U9P0C7N5 309 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 NFYAP23511 347 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-210ENST00000521932 IL3RAP26951 378 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 FCGR2CP31995 323 aa6.71□□□□□ -1.34
VPS13B-210ENST00000521932 HRH1P35367 487 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms