RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 MMP24Q9Y5R2 645 aa15.31■□□□□ 0.04
TRAPPC9-210ENST00000521667 ADGRG4Q8IZF6 3080 aa15.3■□□□□ 0.04
TRAPPC9-210ENST00000521667 C17orf98A8MV24 154 aa15.3■□□□□ 0.04
TRAPPC9-210ENST00000521667 A8MXK9 166 aa15.3■□□□□ 0.04
TRAPPC9-210ENST00000521667 BRWD1-AS2P59051 145 aa15.3■□□□□ 0.04
TRAPPC9-210ENST00000521667 CDSNQ15517 529 aa15.3■□□□□ 0.04
TRAPPC9-210ENST00000521667 TMEM106BQ9NUM4 274 aa15.3■□□□□ 0.04
TRAPPC9-210ENST00000521667 NBASA2RRP1 2371 aa15.3■□□□□ 0.04
TRAPPC9-210ENST00000521667 PPIAL4EA0A075B759 164 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 PPIAL4DF5H284 164 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 TMPRSS2O15393 492 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 ATG12O94817 140 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 CLDN14O95500 239 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 PLAUP00749 431 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 PPIAL4FP0DN26 164 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 ZNF816Q0VGE8 651 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 TCF23Q7RTU1 214 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 CCL17Q92583 94 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 CISD1Q9NZ45 108 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 PPIAL4AQ9Y536 164 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 USP24Q9UPU5 2620 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 LINC00473A8K010 186 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 FBXO24O75426 580 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 PAX9P55771 341 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 OR1S2Q8NGQ3 325 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 CORO2AQ92828 525 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 RAB40CQ96S21 281 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 KCNJ16Q9NPI9 418 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 GFOD1Q9NXC2 390 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 COA4Q9NYJ1 87 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 LPAR3Q9UBY5 353 aa15.29■□□□□ 0.04
TRAPPC9-210ENST00000521667 DYSFO75923 2080 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 ZNF729A6NN14 1252 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 ITGB1BP1O14713 200 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 S1PR2O95136 353 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 ZNF134P52741 427 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 BAXQ07812 192 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 SWI5Q1ZZU3 235 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 IFI27L2Q9H2X8 130 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 TAS2R3Q9NYW6 316 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 CACNA1DQ01668 2161 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 IGSF10Q6WRI0 2623 aa15.28■□□□□ 0.04
TRAPPC9-210ENST00000521667 ZNF705EA8MWA4 302 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 B8ZZF3 427 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 SIAH2O43255 324 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 PROP1O75360 226 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 KRASP01116 189 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 G6PCP35575 357 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 SULT1A2P50226 295 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 ODF3L1Q8IXM7 274 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 GINS3Q9BRX5 216 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 LINC00574Q9H8X3 128 aa15.27■□□□□ 0.04
TRAPPC9-210ENST00000521667 SYNGR2O43760 224 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 IGHV3-7P01780 117 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 P0C879 139 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 NDUFB7P17568 137 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 ZP3P21754 424 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 DUTP33316 252 aaKnown RBP15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 RAB7AP51149 207 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 RPL23AP62750 156 aaKnown RBP15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 CD300LFQ8TDQ1 290 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 SAT2Q96F10 170 aaPredicted RBP15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 SLC25A10Q9UBX3 287 aaPredicted RBP15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 LAMP3Q9UQV4 416 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 ICE1Q9Y2F5 2266 aa15.27■□□□□ 0.03
TRAPPC9-210ENST00000521667 DSCAMO60469 2012 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 hADV38S2A0JD32 116 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 TOR1AO14656 332 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 LINC00205P59089 165 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 TMEM30BQ3MIR4 351 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 CCDC28AQ8IWP9 274 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 ZNF295-AS1Q8N0V1 137 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 SMIM8Q96KF7 97 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 ABHD14AQ9BUJ0 271 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 IDI2-AS1Q9NZ38 188 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 WSB1Q9Y6I7 421 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 RAI1Q7Z5J4 1906 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 FAM90A26D6RGX4 464 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 SLC31A2O15432 143 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 SEC11BP0C7V7 166 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 ZNF266Q14584 549 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 CLINT1Q14677 625 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 NCR3LG1Q68D85 454 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 LEAP2Q969E1 77 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 MARC2Q969Z3 335 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 LINC00052Q96N35 136 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 PLA2G2EQ9NZK7 142 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 GAB2Q9UQC2 676 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 LINC00312Q9Y6C7 94 aa15.26■□□□□ 0.03
TRAPPC9-210ENST00000521667 KRBOX1C9JBD0 128 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 M0R1X1 148 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 SHOXO15266 292 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 TXNL1O43396 289 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 MED6O75586 246 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 CST7O76096 145 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 SPP1P10451 314 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 ZNF672Q499Z4 452 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 RPL39P5Q59GN2 51 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 CT45A1Q5HYN5 189 aa15.25■□□□□ 0.03
TRAPPC9-210ENST00000521667 UTF1Q5T230 341 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms