RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PCNPQ8WW12 178 aaKnown RBP11.94□□□□□ -0.5
CLN8-204ENST00000519254 GSX2Q9BZM3 304 aa11.94□□□□□ -0.5
CLN8-204ENST00000519254 LIN7CQ9NUP9 197 aaKnown RBP11.94□□□□□ -0.5
CLN8-204ENST00000519254 JPT1Q9UK76 154 aa11.94□□□□□ -0.5
CLN8-204ENST00000519254 PSG11Q9UQ72 335 aa11.94□□□□□ -0.5
CLN8-204ENST00000519254 A0A0G2JRQ6 117 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 ST8SIA3O43173 380 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 NDUFB3O43676 98 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 NDUFA2O43678 99 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 YPEL1O60688 119 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 FCN3O75636 299 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 ZNF16P17020 682 aaPredicted RBP11.93□□□□□ -0.5
CLN8-204ENST00000519254 OMGP23515 440 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 RPL30P62888 115 aaKnown RBP11.93□□□□□ -0.5
CLN8-204ENST00000519254 SCARB1Q8WTV0 552 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 ABHD14BQ96IU4 210 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 YPEL2Q96QA6 119 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 SPIN2AQ99865 258 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 SPIN2BQ9BPZ2 258 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 ZNF471Q9BX82 626 aaPredicted RBP11.93□□□□□ -0.5
CLN8-204ENST00000519254 CYTL1Q9NRR1 136 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 GNG12Q9UBI6 72 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 POMT1Q9Y6A1 747 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
CLN8-204ENST00000519254 GCN1Q92616 2671 aaKnown RBP11.92□□□□□ -0.5
CLN8-204ENST00000519254 KBTBD11-OT1A0A1B0GTJ5 212 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 RNF212BA8MTL3 300 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 F5H0A9 414 aaPredicted RBP11.92□□□□□ -0.5
CLN8-204ENST00000519254 DVL1O14640 695 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 LRRC10Q5BKY1 277 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 UTF1Q5T230 341 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 DMBX1Q8NFW5 382 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 H1FXQ92522 213 aaKnown RBP11.92□□□□□ -0.5
CLN8-204ENST00000519254 CORO2AQ92828 525 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 GPR146Q96CH1 333 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 C11orf1Q9H5F2 150 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 SDHAF2Q9NX18 166 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 CLN8Q9UBY8 286 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 RCL1Q9Y2P8 373 aaKnown RBP11.92□□□□□ -0.5
CLN8-204ENST00000519254 TRGV10A0A0A0MS01 117 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 LINC00862A6NCI5 91 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 E5RGE8 158 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 IGKV1-5P01602 117 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 RPL12P30050 165 aaKnown RBP11.92□□□□□ -0.5
CLN8-204ENST00000519254 PDLIM4P50479 330 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 ZNF134P52741 427 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 BRWD1-AS2P59051 145 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 CXorf66Q5JRM2 361 aaPredicted RBP11.92□□□□□ -0.5
CLN8-204ENST00000519254 BTNL3Q6UXE8 466 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 EDARADDQ8WWZ3 215 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 BARX1Q9HBU1 254 aaPredicted RBP11.92□□□□□ -0.5
CLN8-204ENST00000519254 KAAG1Q9UBP8 84 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 NSG2Q9Y328 171 aa11.92□□□□□ -0.5
CLN8-204ENST00000519254 PIGBOS1A0A0B4J2F0 54 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 PROP1O75360 226 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 PITX3O75364 302 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 FSTL3O95633 263 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 SLC25A6P12236 298 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 NKX2-1P43699 371 aaPredicted RBP11.91□□□□□ -0.5
CLN8-204ENST00000519254 ID3Q02535 119 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 TMEM155Q4W5P6 130 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 Q6ZRM9 215 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 STOML3Q8TAV4 291 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 LSM10Q969L4 123 aaKnown RBP11.91□□□□□ -0.5
CLN8-204ENST00000519254 BPESC1Q9GZL8 116 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 GFOD1Q9NXC2 390 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 FBN2P35556 2912 aa11.91□□□□□ -0.5
CLN8-204ENST00000519254 A0A1B0GU03 582 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 ZNF729A6NN14 1252 aaPredicted RBP11.9□□□□□ -0.5
CLN8-204ENST00000519254 RAMP3O60896 148 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 IGHV3-7P01780 117 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 S100A1P23297 94 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 LPAR6P43657 344 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 RAB14P61106 215 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 IZUMO4Q1ZYL8 232 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 Q3ZCU0 254 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 THOC7Q6I9Y2 204 aaKnown RBP11.9□□□□□ -0.5
CLN8-204ENST00000519254 OR8B3Q8NGG8 313 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 FAM168AQ92567 244 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 OR8B2Q96RD0 313 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 C19orf12Q9NSK7 152 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 MIOXQ9UGB7 285 aa11.9□□□□□ -0.5
CLN8-204ENST00000519254 LINC00473A8K010 186 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 C17orf98A8MV24 154 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 NMBP08949 121 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 EPHA1P21709 976 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 P2RY1P47900 373 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 LINC00205P59089 165 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 POLR2GP62487 172 aaKnown RBP eCLIP11.9□□□□□ -0.51
CLN8-204ENST00000519254 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 ZNF66Q6ZN08 573 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 LEAP2Q969E1 77 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 NEIL1Q96FI4 390 aaPredicted RBP11.9□□□□□ -0.51
CLN8-204ENST00000519254 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.51
CLN8-204ENST00000519254 RAB9BQ9NP90 201 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms