RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 MAT2BQ9NZL9 334 aa0.11□□□□□ -2.39
PCM1-208ENST00000518877 RABL2AQ9UBK7 228 aaPredicted RBP0.11□□□□□ -2.39
PCM1-208ENST00000518877 LINC00527Q9UJ94 153 aa0.11□□□□□ -2.39
PCM1-208ENST00000518877 DNAJC12Q9UKB3 198 aa0.11□□□□□ -2.39
PCM1-208ENST00000518877 HHLA2Q9UM44 414 aa0.11□□□□□ -2.39
PCM1-208ENST00000518877 MAST4O15021 2626 aa0.11□□□□□ -2.39
PCM1-208ENST00000518877 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 MED12LQ86YW9 2145 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 LAMB4A4D0S4 1761 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 A0A1B0GW15 77 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 A0A1B0GX12 115 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 E7EWF7 191 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 IGLV3-27P01718 113 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 CCNOP22674 350 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 UGT2B10P36537 528 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 PSMD7P51665 324 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 TMEM258P61165 79 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 Q1T7F1 81 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 BSXQ3C1V8 233 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 C9orf163Q8N9P6 203 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 CLDND2Q8NHS1 167 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 SMCR5Q8TEV8 140 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 GNB1LQ9BYB4 327 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 TTTY13Q9BZ97 58 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 MED28Q9H204 178 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 OR51B6Q9H340 312 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 GOLPH3Q9H4A6 298 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 NCOR1P1Q9H4R4 102 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 C8orf4Q9NR00 106 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 SLC2A9Q9NRM0 540 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 TMEM216Q9P0N5 145 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 GLS2Q9UI32 602 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 ENPP5Q9UJA9 477 aa0.1□□□□□ -2.39
PCM1-208ENST00000518877 RP1P56715 2156 aa0.09□□□□□ -2.39
PCM1-208ENST00000518877 ZNF462Q96JM2 2506 aa0.09□□□□□ -2.39
PCM1-208ENST00000518877 IGHV3-64A0A075B6Q5 118 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 IGKV2D-26A0A0A0MRZ7 120 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 IGKV1-9A0A0C4DH69 117 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 EFCAB9A8MZ26 197 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 BHLHE40O14503 412 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 STK16O75716 305 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 OTCP00480 354 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 CSTAP01040 98 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 CD7P09564 240 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 HSPA9P38646 679 aaKnown RBP0.09□□□□□ -2.4
PCM1-208ENST00000518877 AKR1C3P42330 323 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 RPL27AP46776 148 aaKnown RBP0.09□□□□□ -2.4
PCM1-208ENST00000518877 CDK9P50750 372 aaKnown RBP0.09□□□□□ -2.4
PCM1-208ENST00000518877 VSNL1P62760 191 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 EMX1Q04741 257 aaPredicted RBP0.09□□□□□ -2.4
PCM1-208ENST00000518877 AMTNQ6UX39 209 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 DAND5Q8N907 189 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 CCDC112Q8NEF3 446 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 OR5K1Q8NHB7 308 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 TAMM41Q96BW9 452 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 ACY3Q96HD9 319 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 FAM210AQ96ND0 272 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 ACBD6Q9BR61 282 aa0.09□□□□□ -2.4
PCM1-208ENST00000518877 CD24P25063 80 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 IFNGR2P38484 337 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 TAS2R30P59541 319 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 STK38Q15208 465 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 TBC1D28Q2M2D7 210 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 C18orf21Q32NC0 220 aaPredicted RBP0.08□□□□□ -2.4
PCM1-208ENST00000518877 TMEM42Q69YG0 159 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 C7orf65Q6ZTY9 151 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 SSX6Q7RTT6 188 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 ACBD4Q8NC06 268 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 OR1L8Q8NGR8 309 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 MITD1Q8WV92 249 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 TNFAIP8L1Q8WVP5 186 aa0.08□□□□□ -2.4
PCM1-208ENST00000518877 RBM7Q9Y580 266 aaKnown RBP0.08□□□□□ -2.4
PCM1-208ENST00000518877 BZW2Q9Y6E2 419 aaKnown RBP0.08□□□□□ -2.4
PCM1-208ENST00000518877 PTPRSQ13332 1948 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 ALPK2Q86TB3 2170 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 M0QYV0 167 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 MRASO14807 208 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 ATP6V0CP27449 155 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 ADORA1P30542 326 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 RCVRNP35243 200 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 STC1P52823 247 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 RBM11P57052 281 aaKnown RBP0.07□□□□□ -2.4
PCM1-208ENST00000518877 TAS2R45P59539 299 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 HERVK_113P63121 156 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 RAB31Q13636 194 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 VAMP3Q15836 100 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 SPATA31B1PQ5VZV4 182 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 SLC36A1Q7Z2H8 476 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 KTN1-AS1Q86SY8 53 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 C1orf174Q8IYL3 243 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 PDCL2Q8N4E4 241 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 SFRP2Q96HF1 295 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 RAB1BQ9H0U4 201 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 MRM2Q9UI43 246 aaKnown RBP0.07□□□□□ -2.4
PCM1-208ENST00000518877 POFUT2Q9Y2G5 429 aa0.07□□□□□ -2.4
PCM1-208ENST00000518877 EXPH5Q8NEV8 1989 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 GOLGA8IPA6NC78 632 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 UBE2L6O14933 153 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 BRI3O95415 125 aa0.06□□□□□ -2.4
PCM1-208ENST00000518877 RPSAP08865 295 aaKnown RBP0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms